RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 LRFN3Q9BTN0 628 aa8.95□□□□□ -0.98
LTN1-203ENST00000389195 COL25A1Q9BXS0 654 aaPredicted RBP8.95□□□□□ -0.98
LTN1-203ENST00000389195 ZNF703Q9H7S9 590 aaPredicted RBP8.95□□□□□ -0.98
LTN1-203ENST00000389195 GPR84Q9NQS5 396 aa8.95□□□□□ -0.98
LTN1-203ENST00000389195 TRBV5-7A0A0A0MS05 114 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 A0A1W2PR80 420 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 C21orf140B9A014 251 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 SYT7O43581 403 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 ORC5O43913 435 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 PLATP00750 562 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 DCTDP32321 178 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 MAP2K3P46734 347 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 CX3CR1P49238 355 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 CD83Q01151 205 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 ENDOGQ14249 297 aaKnown RBP8.94□□□□□ -0.98
LTN1-203ENST00000389195 IGFBP7Q16270 282 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 DEFB109BQ30KR1 87 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 SNAI3Q3KNW1 292 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 OR4D10Q8NGI6 311 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 OR8S1Q8NH09 359 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 ASB17Q8WXJ9 295 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 OR51B6Q9H340 312 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 EXO5Q9H790 373 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 ASCL3Q9NQ33 180 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 PLEK2Q9NYT0 353 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 KLHL9Q9P2J3 617 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 CADP27708 2225 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 ANKRD33BA6NCL7 494 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 ZNF716A6NP11 495 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 SLC19A2O60779 497 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 ZNF17P17021 662 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 RAC3P60763 192 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 PPIAP62937 165 aaKnown RBP8.94□□□□□ -0.98
LTN1-203ENST00000389195 HIST3H3Q16695 136 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 CEACAM16Q2WEN9 425 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 TMEM69Q5SWH9 247 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 KLHL24Q6TFL4 600 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 ASCL5Q7RTU5 278 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 AAED1Q7RTV5 226 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 ACBD4Q8NC06 268 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 NABP1Q96AH0 204 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 MICU1Q9BPX6 476 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 B3GNT4Q9C0J1 378 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 SLC22A4Q9H015 551 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 RCE1Q9Y256 329 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 POLEQ07864 2286 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 GTF3C1Q12789 2109 aa8.94□□□□□ -0.98
LTN1-203ENST00000389195 LRBAP50851 2863 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 A0A087WZY1 265 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 DHHO43323 396 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 BTCP35070 178 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 PTH2RP49190 550 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 CSNK2A1P68400 391 aaPredicted RBP8.93□□□□□ -0.98
LTN1-203ENST00000389195 CDC20Q12834 499 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 AIMP2Q13155 320 aaKnown RBP8.93□□□□□ -0.98
LTN1-203ENST00000389195 ASAH1Q13510 395 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 PCK2Q16822 640 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 TATDN3Q17R31 274 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 SLC22A6Q4U2R8 563 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 TSPO2Q5TGU0 170 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 RAB43Q86YS6 212 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 GCNT2Q8N0V5 402 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 ARMC10Q8N2F6 343 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 OR2V1Q8NHB1 315 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 ACOT12Q8WYK0 555 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 NTNG2Q96CW9 530 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 SLITRK2Q9H156 845 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 ZNF552Q9H707 407 aaPredicted RBP8.93□□□□□ -0.98
LTN1-203ENST00000389195 NUDT15Q9NV35 164 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 MCUBQ9NWR8 336 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 HHLA2Q9UM44 414 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 PTPRBP23467 1997 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 TRAV18A0A075B6X5 111 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 ZNF503-AS2A6NEH8 195 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 TGM6O95932 706 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 SP1P08047 785 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 GDNFP39905 211 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 CAPZA2P47755 286 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 LHX2P50458 406 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 EIF3IQ13347 325 aaKnown RBP8.93□□□□□ -0.98
LTN1-203ENST00000389195 ZNF627Q7L945 461 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 OR6S1Q8NH40 331 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 FAM3DQ96BQ1 224 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 ADGRG7Q96K78 797 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 LYZL4Q96KX0 146 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 KCNJ15Q99712 375 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 ATG5Q9H1Y0 275 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 ZCCHC4Q9H5U6 513 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 LDAHQ9H6V9 325 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 CNTD2Q9H8S5 307 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 RANGRFQ9HD47 186 aaPredicted RBP8.93□□□□□ -0.98
LTN1-203ENST00000389195 TBCCD1Q9NVR7 557 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 DLL3Q9NYJ7 618 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 FOXJ3Q9UPW0 622 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 PCDHGA1Q9Y5H4 931 aa8.93□□□□□ -0.98
LTN1-203ENST00000389195 A0A1B0GTI1 187 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 TMEM272A0A1B0GTI8 110 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 PRR33A8MZF0 331 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 CENPBD1B2RD01 187 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 K7EM74 188 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms