RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 VAX2Q9UIW0 290 aa4.46□□□□□ -1.69
PTPRD-203ENST00000381196 GOLT1BQ9Y3E0 138 aa4.46□□□□□ -1.69
PTPRD-203ENST00000381196 V9GYH0 126 aa4.46□□□□□ -1.69
PTPRD-203ENST00000381196 DRGXA6NNA5 263 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 A8MV72 311 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 CST3P01034 146 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ARSAP15289 507 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 CATR1Q13166 79 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 MYBPHQ13203 477 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 NHLRC3Q5JS37 347 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 PAGE3Q5JUK9 113 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 FRMD1Q8N878 549 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 OR51G2Q8NGK0 314 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 OR5M1Q8NGP8 315 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 NPAS1Q99742 590 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 LIN7CQ9NUP9 197 aaKnown RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 BOKQ9UMX3 212 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 SBF1O95248 1867 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 A0A087X0M5 115 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 A0A1B0GW15 77 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 A0A1B0GX30 115 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 UBE2CO00762 179 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 CYTIPO60759 359 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 PTHP01270 115 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 CD37P11049 281 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ICAM2P13598 275 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 FABP4P15090 132 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ZNF44P15621 663 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ZNF136P52737 540 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ZNF252P-AS1Q0IIN9 211 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 HLXQ14774 488 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 OR7A5Q15622 319 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 SGCAQ16586 387 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 FBXW12Q6X9E4 464 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 FJX1Q86VR8 437 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 MRPL43Q8N983 215 aaKnown RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 OR4K13Q8NH42 304 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 SLC25A43Q8WUT9 341 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 PBX4Q9BYU1 374 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 CMC2Q9NRP2 79 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 OPN4Q9UHM6 478 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 HCFC2Q9Y5Z7 792 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 OR2A4O95047 310 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 DLX2Q07687 328 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 SHHQ15465 462 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 PRSS54Q6PEW0 395 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 TRAPPC6BQ86SZ2 158 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 MDGA1Q8NFP4 955 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 OR5A2Q8NGI9 324 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 OR2A7Q96R45 310 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 NKX3-1Q99801 234 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 C16orf70Q9BSU1 422 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 RHOFQ9HBH0 211 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 B3GALT5Q9Y2C3 310 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 COL4A1P02462 1669 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 IGLV3-10A0A075B6K4 115 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 XKRY2A2RUG3 117 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 J3QLW9 94 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 KLK1P06870 262 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 HLA-DOBP13765 273 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ZNF19P17023 458 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 GJA5P36382 358 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 KIR2DS3Q14952 304 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 EBPQ15125 230 aaKnown RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 C18orf21Q32NC0 220 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 TMEM176BQ3YBM2 270 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ZFP82Q8N141 532 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 CELF2-AS1Q8N7Q2 184 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 OR13C4Q8NGS5 318 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 CASTOR1Q8WTX7 329 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 KHSRPQ92945 711 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 FER1L6-AS2Q96M78 137 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 CABLES2Q9BTV7 478 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 GPR55Q9Y2T6 319 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 LOC102723532A0A0G2JNH3 316 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 TCRBV7S3A2A0A539 114 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 PLSCR5A0PG75 271 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 VSTM2BA6NLU5 285 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ARPC3O15145 178 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 HPNP05981 417 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ALDOCP09972 364 aaKnown RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 GABRA1P14867 456 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 HIST1H1TP22492 207 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 P2RY1P47900 373 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 TAS2R45P59539 299 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 PPP1CBP62140 327 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 POLR2GP62487 172 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ACER2Q5QJU3 275 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 ZNF687Q8N1G0 1237 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 SUMF1Q8NBK3 374 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 TMEM178AQ8NBL3 297 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 OR4K15Q8NH41 348 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 FIBINQ8TAL6 211 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 SDF2Q99470 211 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 COL25A1Q9BXS0 654 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 POFUT1Q9H488 388 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 POLR2AP24928 1970 aaKnown RBP4.46□□□□□ -1.7
PTPRD-203ENST00000381196 M0QZQ0 153 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 CDK2AP1O14519 115 aa4.46□□□□□ -1.7
PTPRD-203ENST00000381196 TCAPO15273 167 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms