RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ZNF629Q9UEG4 869 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-203ENST00000378037 PCDHGB2Q9Y5G2 931 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 TEX13DA0A0J9YY54 714 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-203ENST00000378037 METTL21EPA6NDL7 271 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF701M0R085 212 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-203ENST00000378037 EIF4E2O60573 245 aaKnown RBP7.22□□□□□ -1.25
CKAP2-203ENST00000378037 H2AFB2P0C5Z0 115 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 NPY4RP50391 375 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 SOX8P57073 446 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 PLP2Q04941 152 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 IL10RAQ13651 578 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 RSU1Q15404 277 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF362Q5T0B9 420 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-203ENST00000378037 PLCXD3Q63HM9 321 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 GLIPR1L1Q6UWM5 242 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 TUSC5Q8IXB3 177 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 GIMAP1Q8WWP7 306 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 SUCNR1Q9BXA5 334 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 PARP12Q9H0J9 701 aaKnown RBP7.22□□□□□ -1.25
CKAP2-203ENST00000378037 METTL8Q9H825 291 aaKnown RBP7.22□□□□□ -1.25
CKAP2-203ENST00000378037 CACNG2Q9Y698 323 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 EML6Q6ZMW3 1958 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 HIVEP2P31629 2446 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 UPK3AO75631 287 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 EPXP11678 715 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 BLVRBP30043 206 aaPredicted RBP7.21□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF93P35789 620 aaPredicted RBP7.21□□□□□ -1.25
CKAP2-203ENST00000378037 ARPC4P59998 168 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 PSMA6P60900 246 aaKnown RBP7.21□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF79Q15937 498 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 C2orf76Q3KRA6 126 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 MEX3BQ6ZN04 569 aaKnown RBP7.21□□□□□ -1.25
CKAP2-203ENST00000378037 TMPPEQ6ZT21 453 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 Q6ZTK2 550 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 HAVCR2Q8TDQ0 301 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 ACOT12Q8WYK0 555 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 RDH5Q92781 318 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 NAA11Q9BSU3 229 aaPredicted RBP7.21□□□□□ -1.25
CKAP2-203ENST00000378037 METTL17Q9H7H0 456 aaPredicted RBP7.21□□□□□ -1.25
CKAP2-203ENST00000378037 CLDN16Q9Y5I7 305 aa7.21□□□□□ -1.25
CKAP2-203ENST00000378037 ZSCAN5BA6NJL1 495 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 HS3ST1O14792 307 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 GMDSO60547 372 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 RAB3DO95716 219 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 CD3DP04234 171 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 ALDOBP05062 364 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 HOXB5P09067 269 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 ZNF44P15621 663 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 AMY2BP19961 511 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 MAPK3P27361 379 aaPredicted RBP7.21□□□□□ -1.26
CKAP2-203ENST00000378037 HTR2CP28335 458 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 ARHGDIBP52566 201 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 UBE2NP61088 152 aaKnown RBP7.21□□□□□ -1.26
CKAP2-203ENST00000378037 PMPCAQ10713 525 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 SLC17A1Q14916 467 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 ZNF181Q2M3W8 571 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 TMEM201Q5SNT2 666 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 SLC23A3Q6PIS1 610 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 Q6ZNX1 250 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 MRGPREQ86SM8 312 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 PIGQQ9BRB3 760 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 SMIM3Q9BZL3 60 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 CLEC4MQ9H2X3 399 aaPredicted RBP7.21□□□□□ -1.26
CKAP2-203ENST00000378037 ANKRD19PQ9H560 264 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 PLEKHJ1Q9NW61 149 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 MCTS1Q9ULC4 181 aaKnown RBP7.21□□□□□ -1.26
CKAP2-203ENST00000378037 DSPPQ9NZW4 1301 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 CCDC187A0A096LP49 1063 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 IFITM5A6NNB3 132 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 GOSR2O14653 212 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 PTP4A3O75365 173 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 SLC43A1O75387 559 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 UMODP07911 640 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 CSNK2A1P68400 391 aaPredicted RBP7.21□□□□□ -1.26
CKAP2-203ENST00000378037 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.21□□□□□ -1.26
CKAP2-203ENST00000378037 RNASE10Q5GAN6 216 aaKnown RBP7.21□□□□□ -1.26
CKAP2-203ENST00000378037 XKRXQ6PP77 449 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 ZNF679Q8IYX0 411 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 GALNT16Q8N428 558 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 CSNK2A3Q8NEV1 391 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 OTOSQ8NHW6 89 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 ZNF431Q8TF32 576 aaPredicted RBP7.21□□□□□ -1.26
CKAP2-203ENST00000378037 CHPT1Q8WUD6 406 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 CLDN23Q96B33 292 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 BORCS8Q96FH0 119 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 TIMP4Q99727 224 aa7.21□□□□□ -1.26
CKAP2-203ENST00000378037 BOKQ9UMX3 212 aaPredicted RBP7.21□□□□□ -1.26
CKAP2-203ENST00000378037 PKD1L2Q7Z442 2459 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 M0R135 149 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 NUPL2O15504 423 aaKnown RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 SGCEO43556 437 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 TSPAN2O60636 221 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 AGFG2O95081 481 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 SERPINA5P05154 406 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 CD46P15529 392 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 ZNF32P17041 273 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 ALOX5APP20292 161 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 RAB3AP20336 220 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 BMP5P22003 454 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 EIF2S3P41091 472 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms