RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 TUBG2Q9NRH3 451 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 MRPL22Q9NWU5 206 aaKnown RBP9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 TMEM160Q9NX00 188 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 KIF17Q9P2E2 1029 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 CYB5R1Q9UHQ9 305 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 POMPQ9Y244 141 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 N6AMT1Q9Y5N5 214 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 YLPM1P49750 1951 aaKnown RBP9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 ABCA2Q9BZC7 2435 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 FKBP6O75344 327 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 LCATP04180 440 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 CLUP10909 449 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 SPI1P17947 270 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 SRD5A1P18405 259 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 KITLGP21583 273 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 FMO3P31513 532 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 GGT2P36268 569 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 TPTEP56180 551 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 PRSS12P56730 875 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 HIST1H3AP68431 136 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 SLC3A1Q07837 685 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 ECH1Q13011 328 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 HNRNPA0Q13151 305 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 GK3PQ14409 553 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 TAF13Q15543 124 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 HIST2H3PS2Q5TEC6 136 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 HIST2H3AQ71DI3 136 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 SPATC1Q76KD6 591 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 DCXRQ7Z4W1 244 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 PEG10Q86TG7 708 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 ZNRF4Q8WWF5 429 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 RAB1CQ92928 201 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 SPTSSAQ969W0 71 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 GAL3ST1Q99999 423 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 HCAR1Q9BXC0 346 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 CADM1Q9BY67 442 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 MED20Q9H944 212 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 KCNG2Q9UJ96 466 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 WIPI2Q9Y4P8 454 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 COMMD3-BMI1R4GMX3 469 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 ARRDC5A6NEK1 342 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 FAM183AA6NL82 134 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 B4DSR2 109 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 FAM157AC9JC47 383 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 J3QW42 95 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 M0R135 149 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 GSC2O15499 205 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 ACSM4P0C7M7 580 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 FAM157CP0CG43 387 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 RAC2P15153 192 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 HOXB6P17509 224 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 TNFRSF1AP19438 455 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 SRP14P37108 136 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 ENTPD1P49961 510 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 RASSF2P50749 326 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 SLC25A1P53007 311 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 BNIP1Q12981 228 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 MALLQ13021 153 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 SPRNQ5BIV9 151 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 SLC27A4Q6P1M0 643 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 GLCCI1Q86VQ1 547 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 ZNF511Q8NB15 262 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 OR10AD1Q8NGE0 317 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 ITLN1Q8WWA0 313 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 HAVCR1Q96D42 359 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 ZNF799Q96GE5 643 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 MAP6Q96JE9 813 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 ZNF582Q96NG8 517 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 RBM4Q9BWF3 364 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 OR51V1Q9H2C8 321 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 ZNF665Q9H7R5 613 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 CENPMQ9NSP4 180 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 UBAP1Q9NZ09 502 aa9.82□□□□□ -0.84
SMARCE1-203ENST00000377808 IGHV3-64DA0A0J9YX35 117 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 TCRBV3S1A0A5B6 114 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 ZNF593O00488 134 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 SURF4O15260 269 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 TIPRLO75663 272 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 CD55P08174 381 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 PSKH1P11801 424 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 PAICSP22234 425 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 PRKACGP22612 351 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 GRK5P34947 590 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 RBMXP38159 391 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 CDK5R2Q13319 367 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 EIF2B1Q14232 305 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 GINS1Q14691 196 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 KLHL12Q53G59 568 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 ZNF362Q5T0B9 420 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 CD300LDQ6UXZ3 194 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 FBXW12Q6X9E4 464 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 Q6ZR03 302 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 MRPL21Q7Z2W9 205 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 NAA40Q86UY6 237 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 ERI1Q8IV48 349 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 OR6N2Q8NGY6 317 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 OR51F2Q8NH61 342 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 SLCO4A1Q96BD0 722 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 RAB39BQ96DA2 213 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 PLEKHA8Q96JA3 519 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms