RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 IL1RAPQ9NPH3 570 aa16.14■□□□□ 0.17
CBWD3-204ENST00000377349 PPIAL4AQ9Y536 164 aa16.14■□□□□ 0.17
CBWD3-204ENST00000377349 LHFPL6Q9Y693 200 aa16.14■□□□□ 0.17
CBWD3-204ENST00000377349 IGHV3-64DA0A0J9YX35 117 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 KCNAB3O43448 404 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 SBK2P0C263 348 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 MNAT1P51948 309 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 PRSS12P56730 875 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.13■□□□□ 0.17
CBWD3-204ENST00000377349 KLF17Q5JT82 389 aaPredicted RBP16.13■□□□□ 0.17
CBWD3-204ENST00000377349 PGBD2Q6P3X8 592 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 PGM2L1Q6PCE3 622 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 ZNF620Q6ZNG0 422 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 OR10AD1Q8NGE0 317 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 COG8Q96MW5 612 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 POLR3KQ9Y2Y1 108 aaPredicted RBP16.13■□□□□ 0.17
CBWD3-204ENST00000377349 NPTNQ9Y639 398 aa16.13■□□□□ 0.17
CBWD3-204ENST00000377349 IGLV1-36A0A0B4J1U3 117 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 F5H5K5 113 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 TRAPPC2LH3BP13 241 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 SEC61A1P61619 476 aaKnown RBP16.12■□□□□ 0.17
CBWD3-204ENST00000377349 PRKDCP78527 4128 aaKnown RBP16.12■□□□□ 0.17
CBWD3-204ENST00000377349 TSPAN31Q12999 210 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 CDK5R2Q13319 367 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 OR2T2Q6IF00 324 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 Q6ZR03 302 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 FITM2Q8N6M3 262 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 CYB561A3Q8NBI2 242 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 PROKR2Q8NFJ6 384 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 OR5L1Q8NGL2 311 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 ST7LQ8TDW4 575 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 ITLN1Q8WWA0 313 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 PTP4A1Q93096 173 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 C1QTNF5Q9BXJ0 243 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 HDHD2Q9H0R4 259 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 TBC1D23Q9NUY8 699 aa16.12■□□□□ 0.17
CBWD3-204ENST00000377349 TMPRSS2O15393 492 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 FOXH1O75593 365 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 TNFRSF1AP19438 455 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 PYCR1P32322 319 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 GSSP48637 474 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 RGS6P49758 472 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 PRR31Q5SQ13 230 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 CFAP77Q6ZQR2 320 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 ZNF283Q8N7M2 679 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 SIGLECL1Q8N7X8 197 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 CCDC124Q96CT7 223 aaKnown RBP16.11■□□□□ 0.17
CBWD3-204ENST00000377349 OR2V2Q96R30 315 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 SIGLEC11Q96RL6 698 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 CCT8L2Q96SF2 557 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 ZNF747Q9BV97 191 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 NTN4Q9HB63 628 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 TMEM106BQ9NUM4 274 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 ZNF69Q9UC07 566 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 PCDHGB1Q9Y5G3 927 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 LYVE1Q9Y5Y7 322 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 CDH10Q9Y6N8 788 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 U3KQV3 271 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 OR6C68A6NDL8 312 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 KRT36O76013 467 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 CCNB2O95067 398 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 HKR1P10072 659 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 KITLGP21583 273 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 FPR2P25090 351 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 KCNMB1Q16558 191 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 SLC36A3Q495N2 470 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 DOK3Q7L591 496 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 DHFR2Q86XF0 187 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 SLC26A10Q8NG04 563 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 OR51L1Q8NGJ5 315 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 POP5Q969H6 163 aaKnown RBP16.11■□□□□ 0.17
CBWD3-204ENST00000377349 APOBEC3DQ96AK3 386 aaPredicted RBP16.11■□□□□ 0.17
CBWD3-204ENST00000377349 HAVCR1Q96D42 359 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 NSL1Q96IY1 281 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 ZNF48Q96MX3 618 aaPredicted RBP16.11■□□□□ 0.17
CBWD3-204ENST00000377349 COQ7Q99807 217 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 BTBD10Q9BSF8 475 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 PATZ1Q9HBE1 687 aaKnown RBP16.11■□□□□ 0.17
CBWD3-204ENST00000377349 ACTR3BQ9P1U1 418 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 PPP1R3CQ9UQK1 317 aa16.11■□□□□ 0.17
CBWD3-204ENST00000377349 TVP23AA6NH52 213 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 F5H0A9 414 aaPredicted RBP16.1■□□□□ 0.17
CBWD3-204ENST00000377349 ARPC3O15145 178 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 SURF4O15260 269 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 SOX14O95416 240 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 ZNF823P16415 610 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 ZNF12P17014 697 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 TUBG1P23258 451 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 RPS27P42677 84 aaKnown RBP16.1■□□□□ 0.17
CBWD3-204ENST00000377349 SLC6A9P48067 706 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 COX10Q12887 443 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 ZNF154Q13106 437 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 ZMYND11Q15326 602 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 BCL6BQ8N143 479 aaPredicted RBP16.1■□□□□ 0.17
CBWD3-204ENST00000377349 AQP11Q8NBQ7 271 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 CCDC197Q8NCU1 140 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 ZNF582Q96NG8 517 aaPredicted RBP16.1■□□□□ 0.17
CBWD3-204ENST00000377349 ATF6BQ99941 703 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 TUBG2Q9NRH3 451 aa16.1■□□□□ 0.17
CBWD3-204ENST00000377349 DDX28Q9NUL7 540 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms