RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CAV2P51636 162 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 NKX6-1P78426 367 aaPredicted RBP13.97□□□□□ -0.17
FXN-201ENST00000377270 ST3GAL3Q11203 375 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 MFSD12Q6NUT3 480 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 FAAP20Q6NZ36 180 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 FIGLAQ6QHK4 219 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 C1orf122Q6ZSJ8 110 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 CMTM4Q8IZR5 234 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 EID2Q8N6I1 236 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 OR52N4Q8NGI2 321 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 DOK4Q8TEW6 326 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 THRSPQ92748 146 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 VPS25Q9BRG1 176 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 SLITRK2Q9H156 845 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 TMEM74BQ9NUR3 256 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 SUSD2Q9UGT4 822 aa13.97□□□□□ -0.17
FXN-201ENST00000377270 ZNF223Q9UK11 482 aaPredicted RBP13.97□□□□□ -0.17
FXN-201ENST00000377270 A0A087WZY1 265 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 TRAV1-2A0A0B4J238 106 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 DAPL1A0PJW8 107 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 K7EP13 123 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 MAGEB4O15481 346 aaPredicted RBP13.96□□□□□ -0.17
FXN-201ENST00000377270 OR2F2O95006 317 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 NDUFV2P19404 249 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 PTTG1IPP53801 180 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 ID2Q02363 134 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 OR2F1Q13607 317 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 GPR18Q14330 331 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 HERPUD1Q15011 391 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 FCRL6Q6DN72 434 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 TMEFF1Q8IYR6 380 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 RNF141Q8WVD5 230 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 DIO2Q92813 273 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 FAM46AQ96IP4 442 aaKnown RBP13.96□□□□□ -0.17
FXN-201ENST00000377270 HSPA12BQ96MM6 686 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 SULT4A1Q9BR01 284 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 KLK11Q9UBX7 282 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 YLPM1P49750 1951 aaKnown RBP13.96□□□□□ -0.17
FXN-201ENST00000377270 TEX13DA0A0J9YY54 714 aaPredicted RBP13.96□□□□□ -0.17
FXN-201ENST00000377270 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.96□□□□□ -0.17
FXN-201ENST00000377270 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.96□□□□□ -0.17
FXN-201ENST00000377270 ANKRD20A5PA0PJZ0 165 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 ZNF860A6NHJ4 632 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 NKX6-3A6NJ46 265 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 MFNGO00587 321 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 B3GALT2O43825 422 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 SLC2A10O95528 541 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 MT-ND5P03915 603 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 CD80P33681 288 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 FGF8P55075 233 aaPredicted RBP13.96□□□□□ -0.17
FXN-201ENST00000377270 RGS8P57771 180 aaPredicted RBP13.96□□□□□ -0.17
FXN-201ENST00000377270 WDR73Q6P4I2 378 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 KIRREL2Q6UWL6 708 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 TMEM92Q6UXU6 159 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 CPOQ8IVL8 374 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 TMEM99Q8N816 258 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 OR4K15Q8NH41 348 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 LGALS14Q8TCE9 139 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 BRIX1Q8TDN6 353 aaKnown RBP13.96□□□□□ -0.17
FXN-201ENST00000377270 FCAMRQ8WWV6 532 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 PATE1Q8WXA2 126 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 HIST1H2BLQ99880 126 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 CHST11Q9NPF2 352 aa13.96□□□□□ -0.17
FXN-201ENST00000377270 HINT3Q9NQE9 182 aaKnown RBP13.96□□□□□ -0.17
FXN-201ENST00000377270 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.96□□□□□ -0.17
FXN-201ENST00000377270 TMEM272A0A1B0GTI8 110 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 FLRT2O43155 660 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 TNFSF14O43557 240 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 SMIM10L1P0DMW3 83 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 EPHA1P21709 976 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 HTR2CP28335 458 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 CCR5P51681 352 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 AFF3P51826 1226 aaKnown RBP13.95□□□□□ -0.18
FXN-201ENST00000377270 ZNF345Q14585 488 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 ZNF674Q2M3X9 581 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 PGGHGQ32M88 737 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 FRRS1Q6ZNA5 592 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 SYT9Q86SS6 491 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 KMT5CQ86Y97 462 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 C17orf47Q8NEP4 570 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 M1APQ8TC57 530 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 NUDCD2Q8WVJ2 157 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 RELTQ969Z4 430 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 NTNG2Q96CW9 530 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 SMIM10Q96HG1 83 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 NDC1Q9BTX1 674 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 DAPP1Q9UN19 280 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 SCN2AQ99250 2005 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 TMEM235A6NFC5 223 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 AGPAT2O15120 278 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 ERVFC1-1P60608 527 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 TRMT12Q53H54 448 aaKnown RBP13.95□□□□□ -0.18
FXN-201ENST00000377270 OR8G2PQ6IF36 304 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 GJD3Q8N144 294 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 C11orf42Q8N5U0 333 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 RRNAD1Q96FB5 475 aaKnown RBP13.95□□□□□ -0.18
FXN-201ENST00000377270 MCHR1Q99705 422 aa13.95□□□□□ -0.18
FXN-201ENST00000377270 MTHFD2LQ9H903 347 aaPredicted RBP13.95□□□□□ -0.18
FXN-201ENST00000377270 ZNF230Q9UIE0 474 aaPredicted RBP13.95□□□□□ -0.18
FXN-201ENST00000377270 TNFSF18Q9UNG2 199 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms