RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 HIST1H2BAQ96A08 127 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 STRADBQ9C0K7 418 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 MYOZ1Q9NP98 299 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 SHPKQ9UHJ6 478 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 SCN3AQ9NY46 2000 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 ASPMQ8IZT6 3477 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 EEF1E1-BLOC1S5C9J1V9 151 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 MCIDASD6RGH6 385 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 CSN2P05814 226 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 SFTA3P0C7M3 94 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 ZNF888P0CJ79 500 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 F2RL1P55085 397 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 FHL1Q13642 323 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 ODF4Q2M2E3 257 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 PRTGQ2VWP7 1150 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 BIVMQ86UB2 503 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 TMEM229BQ8NBD8 167 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 SLC30A7Q8NEW0 376 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 OR4K17Q8NGC6 315 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 RNF166Q96A37 237 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 NAA11Q9BSU3 229 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 EGLN1Q9GZT9 426 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 FBXO34Q9NWN3 711 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 FRRS1LQ9P0K9 344 aa13.49□□□□□ -0.25
CCHCR1-201ENST00000376266 F8VVB4 439 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 F8VWA3 439 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 CDC40O60508 579 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 FBXO45P0C2W1 286 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 C2orf76Q3KRA6 126 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 PRSS41Q7RTY9 318 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 BPIFB2Q8N4F0 458 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 OR2L5Q8NG80 312 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 ZNF417Q8TAU3 575 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 DOK4Q8TEW6 326 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 TMEM106AQ96A25 262 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 FOXRED1Q96CU9 486 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 LRFN5Q96NI6 719 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 GAL3ST1Q99999 423 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 SEC61A2Q9H9S3 476 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 DLL3Q9NYJ7 618 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 KCNE5Q9UJ90 142 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 LOXL2Q9Y4K0 774 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 A0A1B0GTH9 108 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 A0A1W2PNU3 283 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 ALOX12BO75342 701 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 CLN5O75503 358 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 TIAF1O95411 115 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 CPT2P23786 658 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 AKR1C3P42330 323 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 PGDP52209 483 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 ELAVL1Q15717 326 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 MST1LQ2TV78 715 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 ETV3LQ6ZN32 361 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 RHOUQ7L0Q8 258 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 ARHGEF39Q8N4T4 335 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 DCUN1D4Q92564 292 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 TMEM41AQ96HV5 264 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 ADAD1Q96M93 576 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 PFDN5Q99471 154 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 LAT2Q9GZY6 243 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 RARRES3Q9UL19 164 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
CCHCR1-201ENST00000376266 TRBV5-5A0A0J9YX44 114 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 RNASEK-C17orf49H0YIS7 233 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 NGFRP08138 427 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 CENPAP49450 140 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 CEBPEQ15744 281 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 DEFB134Q4QY38 66 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 OR2B11Q5JQS5 317 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 DCST2Q5T1A1 773 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 OR10K2Q6IF99 312 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 KCTD9Q7L273 389 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 ZNF627Q7L945 461 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 ZNF676Q8N7Q3 588 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 NPEPL1Q8NDH3 523 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 ZPLD1Q8TCW7 415 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 SEH1LQ96EE3 360 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 PTCHD1Q96NR3 888 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 WDR77Q9BQA1 342 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 ZNF350Q9GZX5 532 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 LOC100509620A0A075B734 347 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 TMEM72A0PK05 275 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 FITM1A5D6W6 292 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 ZNF729A6NN14 1252 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 CYB5AP00167 134 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 FAM157CP0CG43 387 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 NQO2P16083 231 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 AGAP20933 346 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 EIF2S3P41091 472 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 CAV2P51636 162 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 BTN3A2P78410 334 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 CDNFQ49AH0 187 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 FAM76BQ5HYJ3 339 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 C9orf152Q5JTZ5 239 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 SLC35D3Q5M8T2 416 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 ZNF684Q5T5D7 378 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 SLC29A4Q7RTT9 530 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 LYG2Q86SG7 212 aa13.47□□□□□ -0.25
CCHCR1-201ENST00000376266 LRRC25Q8N386 305 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms