RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 SELENOHQ8IZQ5 122 aaKnown RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 ABHD3Q8WU67 409 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 PTPMT1Q8WUK0 201 aaPredicted RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 NAT6Q93015 286 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 SLC35A4Q96G79 324 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 SLC39A13Q96H72 371 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 MAP6Q96JE9 813 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 EBF4Q9BQW3 602 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 CSNK1G1Q9HCP0 422 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 PARD6AQ9NPB6 346 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 DZANK1Q9NVP4 752 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 ZNF391Q9UJN7 358 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 SAMD9LQ8IVG5 1584 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 LRRC10BA6NIK2 292 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 SIGLEC16A6NMB1 481 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 P2RY10O00398 339 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 TNFSF15O95150 251 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 IAPPP10997 89 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 NAT2P11245 290 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 CEACAM8P31997 349 aaPredicted RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 CCR2P41597 374 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 RPS24P62847 133 aaKnown RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 TMEM115Q12893 351 aaPredicted RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 SOHLH1Q5JUK2 328 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 NDUFAF7Q7L592 441 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 OR6V1Q8N148 313 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 RLN3Q8WXF3 142 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 CDS1Q92903 461 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 DPH7Q9BTV6 452 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 LPAR5Q9H1C0 372 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 RNF186Q9NXI6 227 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 ADGRL3Q9HAR2 1447 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 MAP3K4Q9Y6R4 1608 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 hCG_1818297A0A087WSY0 165 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 A0A096LPE4 126 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 TRAV12-3A0A0B4J271 114 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 A0A1W2PPZ6 126 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 GPRIN2O60269 458 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 CA3P07451 260 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 BRS3P32247 399 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 IDUAP35475 653 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 METAP1P53582 386 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 MVDP53602 400 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 RPS26P62854 115 aaKnown RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 ACSM1Q08AH1 577 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 TMEM267Q0VDI3 215 aaPredicted RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 JOSD1Q15040 202 aaPredicted RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 IAH1Q2TAA2 248 aaPredicted RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 SLC25A52Q3SY17 297 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 WDR25Q64LD2 544 aaPredicted RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 ANKRD54Q6NXT1 300 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 CLEC2AQ6UVW9 174 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 FAM122BQ7Z309 247 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 SYT8Q8NBV8 401 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 C14orf79Q96F83 325 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 TOX2Q96NM4 488 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 ZNF426Q9BUY5 554 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 COL25A1Q9BXS0 654 aaPredicted RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 RHOJQ9H4E5 214 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 IL17RBQ9NRM6 502 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 WRAP73Q9P2S5 460 aaPredicted RBP4.26□□□□□ -1.73
SCN1A-202ENST00000375405 TNS3Q68CZ2 1445 aa4.26□□□□□ -1.73
SCN1A-202ENST00000375405 DOCK6Q96HP0 2047 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 EP300Q09472 2414 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 C5orf49A4QMS7 147 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 HEPACAM2A8MVW5 462 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 FZD7O75084 574 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 HTR7P34969 479 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 RTL6Q6ICC9 239 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 NCCRP1Q6ZVX7 275 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 CENPVQ7Z7K6 275 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 CXorf67Q86X51 503 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 DBF4BQ8NFT6 615 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 ZMYND19Q96E35 227 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 ZNF48Q96MX3 618 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 METTL26Q96S19 204 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 PRRT1Q99946 306 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 PCGF1Q9BSM1 259 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 SLC12A9Q9BXP2 914 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 ABCC3O15438 1527 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 TRGV10A0A0A0MS01 117 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 MEGF11A6BM72 1044 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 OR4C45A6NMZ5 311 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 SLC22A1O15245 554 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 HPRP00739 348 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 SAA1P0DJI8 122 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 VDAC1P21796 283 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 COMPP49747 757 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 CAMPP49913 170 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 PGGHGQ32M88 737 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 ACOT6Q3I5F7 207 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-202ENST00000375405 ZNF805Q5CZA5 627 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 OR7E24Q6IFN5 339 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 OR1L8Q8NGR8 309 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 OR1P1Q8NH06 330 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 ASB5Q8WWX0 329 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 RAB40AQ8WXH6 277 aa4.25□□□□□ -1.73
SCN1A-202ENST00000375405 TMEM158Q8WZ71 300 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms