RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ZFAND6Q6FIF0 208 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 SECTM1Q8WVN6 248 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 ADAT3Q96EY9 351 aaPredicted RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 NEIL1Q96FI4 390 aaPredicted RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 ZFYVE21Q9BQ24 234 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 NDFIP1Q9BT67 221 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 OR2D2Q9H210 308 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 CNIH4Q9P003 139 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 PRRX1P54821 245 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 SEMG2Q02383 582 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 SLC25A42Q86VD7 318 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 BOD1Q96IK1 185 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 P2RX4Q99571 388 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 RABAC1Q9UI14 185 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 A0A087WWC5 75 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 YJEFN3A6XGL0 299 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 FAM87AP0C7U9 286 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 ARSJQ5FYB0 599 aaPredicted RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 OR1P1Q8NH06 330 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 HAPLN2Q9GZV7 340 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 USP22Q9UPT9 525 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 ZNF195O14628 629 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 C8AP07357 584 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 SLC25A6P12236 298 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 PTGER4P35408 488 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 GPR162Q16538 588 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 SHDQ96IW2 340 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 CMC2Q9NRP2 79 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 ZFP37Q9Y6Q3 630 aaPredicted RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 UBE2CO00762 179 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 KCNQ2O43526 872 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 SDC1P18827 310 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 PPP2CAP67775 309 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 DHRS2Q13268 280 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 MOB3AQ96BX8 217 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 BARHL1Q9BZE3 327 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 ANKRD30BLA7E2S9 258 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 CD300CQ08708 224 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 MESTQ5EB52 335 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 Q7L0L9 218 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 OR10J5Q8NHC4 309 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 ROBO4Q8WZ75 1007 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 EGLN2Q96KS0 407 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 CDX2Q99626 313 aaPredicted RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 CHST8Q9H2A9 424 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 DNAJC4Q9NNZ3 241 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 KLK11Q9UBX7 282 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 SEMG1P04279 462 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 OR1D4P47884 311 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 NPY5RQ15761 445 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 VN1R17PQ8TDU5 208 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 LSM2Q9Y333 95 aaKnown RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 CLEC18AA5D8T8 446 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 NCBP2LA6PVI3 153 aaKnown RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 TNFRSF10CO14798 259 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 CBR3O75828 277 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 ARG1P05089 322 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 MRPL54Q6P161 138 aaKnown RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 CLEC18CQ8NCF0 446 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 CNTD2Q9H8S5 307 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 TBC1D3IA0A087WXS9 549 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 A0A1W2PNV4 684 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 C9orf170A2RU37 121 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 CDS2O95674 445 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 TMEM268Q5VZI3 342 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 H2BFWTQ7Z2G1 175 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 KLHDC8AQ8IYD2 350 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 H1FOOQ8IZA3 346 aaPredicted RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 RPS4Y2Q8TD47 263 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 RTN4IP1Q8WWV3 396 aaPredicted RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 OR2A5Q96R48 311 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 ZBP1Q9H171 429 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 SFT2D2O95562 160 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 HLA-DRB1P01911 266 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 CD3DP04234 171 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 TMEM33P57088 247 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 SLC10A6Q3KNW5 377 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 DOK3Q7L591 496 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 C2orf73Q8N5S3 287 aaPredicted RBP6.04□□□□□ -1.44
UBR4-204ENST00000375254 NUBPLQ8TB37 319 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 SOCS4Q8WXH5 440 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 ANAPC13Q9BS18 74 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 PPP1R3EQ9H7J1 279 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 PADI3Q9ULW8 664 aa6.04□□□□□ -1.44
UBR4-204ENST00000375254 TBC1D3DA0A087WVF3 549 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 TBC1D3LB9A6J9 549 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 TBC1D3HP0C7X1 549 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 ESDP10768 282 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 PSMB10P40306 273 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 TPGS2Q68CL5 300 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 TBC1D3CQ6IPX1 549 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 LHFPL4Q7Z7J7 247 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 TBC1D3Q8IZP1 549 aaPredicted RBP6.03□□□□□ -1.44
UBR4-204ENST00000375254 OR2J1Q9GZK6 312 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 ADH4P08319 380 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 Q1RN00 199 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 DEGS2Q6QHC5 323 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 SLC5A6Q9Y289 635 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 PDE4DIPQ5VU43 2346 aa6.03□□□□□ -1.44
UBR4-204ENST00000375254 IRF2P14316 349 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms