RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 DCDP81605 110 aaKnown RBP12.43□□□□□ -0.42
HMGCL-203ENST00000374490 C4orf46Q504U0 113 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 LPCAT3Q6P1A2 487 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 MDGA2Q7Z553 956 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 BPHLQ86WA6 291 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-203ENST00000374490 JAGN1Q8N5M9 183 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 OR52B4Q8NGK2 314 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 OR2I1PQ8NGU4 316 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 SUN5Q8TC36 379 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 SLC22A8Q8TCC7 542 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 PPP1R14AQ96A00 147 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 FAM46BQ96A09 425 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 SFXN2Q96NB2 322 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 UQCC2Q9BRT2 126 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 TMEM138Q9NPI0 162 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 MED9Q9NWA0 146 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 KLRF1Q9NZS2 232 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 FBLN5Q9UBX5 448 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 CGGBP1Q9UFW8 167 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-203ENST00000374490 RARRES3Q9UL19 164 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 ATXN7L1Q9ULK2 861 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-203ENST00000374490 WASF3Q9UPY6 502 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 ASXL3Q9C0F0 2248 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 ADAMTS20P59510 1910 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 RALGAPA1Q6GYQ0 2036 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 LY6G6EA0A0G2JKS1 128 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 TMEM82A0PJX8 343 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 GOSR2O14653 212 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 ZFAND5O76080 213 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 BPNT1O95861 308 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 ZNF35P13682 527 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 FKBP2P26885 142 aaKnown RBP12.42□□□□□ -0.42
HMGCL-203ENST00000374490 LAP3P28838 519 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 S100A11P31949 105 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 GSK3AP49840 483 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 DUSP3P51452 185 aaPredicted RBP12.42□□□□□ -0.42
HMGCL-203ENST00000374490 CCL7P80098 99 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 FMODQ06828 376 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 SPOCK1Q08629 439 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 CLVS2Q5SYC1 327 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 THEM4Q5T1C6 240 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 OTPQ5XKR4 325 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 RHOUQ7L0Q8 258 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 LYPD6Q86Y78 171 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 LINC00346Q8IVM7 164 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 MUC20Q8N307 709 aaPredicted RBP12.42□□□□□ -0.42
HMGCL-203ENST00000374490 SLC22A24Q8N4F4 322 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 OR4D10Q8NGI6 311 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 LRRC20Q8TCA0 184 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 C11orf40Q8WZ69 217 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 ARL5BQ96KC2 179 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 KCNK15Q9H427 330 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 FAM206AQ9NX38 181 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 MRPS18BQ9Y676 258 aaKnown RBP12.42□□□□□ -0.42
HMGCL-203ENST00000374490 U3KQA8 63 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 SPTBP11277 2137 aa12.42□□□□□ -0.42
HMGCL-203ENST00000374490 ZNF736B4DX44 427 aaPredicted RBP12.41□□□□□ -0.42
HMGCL-203ENST00000374490 CFDP00746 253 aaPredicted RBP12.41□□□□□ -0.42
HMGCL-203ENST00000374490 BIDP55957 195 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 AANATQ16613 207 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 PLPPR5Q32ZL2 321 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 NHLRC3Q5JS37 347 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 SIGIRRQ6IA17 410 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 ARSKQ6UWY0 536 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 SHISA6Q6ZSJ9 500 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 TMUB2Q71RG4 321 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 CPEB2Q7Z5Q1 589 aaKnown RBP12.41□□□□□ -0.42
HMGCL-203ENST00000374490 ZNF584Q8IVC4 421 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 UEVLDQ8IX04 471 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 C12orf45Q8N5I9 185 aaPredicted RBP12.41□□□□□ -0.42
HMGCL-203ENST00000374490 OR8S1Q8NH09 359 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 IFI44Q8TCB0 444 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 SLC25A43Q8WUT9 341 aaPredicted RBP12.41□□□□□ -0.42
HMGCL-203ENST00000374490 SLAMF6Q96DU3 332 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 CENPMQ9NSP4 180 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 SLC2A8Q9NY64 477 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 GDF2Q9UK05 429 aaPredicted RBP12.41□□□□□ -0.42
HMGCL-203ENST00000374490 RALYQ9UKM9 306 aaKnown RBP12.41□□□□□ -0.42
HMGCL-203ENST00000374490 MPDZO75970 2070 aa12.41□□□□□ -0.42
HMGCL-203ENST00000374490 TMEM200CA6NKL6 621 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 I3L521 148 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 P2RY10O00398 339 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 SCRG1O75711 98 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 IGHG1P01857 330 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 AMY2AP04746 511 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 RPA2P15927 270 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 AGTR1P30556 359 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 FGL1Q08830 312 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 FAM189A2Q15884 450 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 ZNF239Q16600 458 aaKnown RBP12.4□□□□□ -0.42
HMGCL-203ENST00000374490 C3orf33Q6P1S2 294 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 C11orf88Q6PI97 169 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 NHLRC1Q6VVB1 395 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 IDO2Q6ZQW0 420 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 KDM8Q8N371 416 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 NOXO1Q8NFA2 376 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 OR1M1Q8NGA1 313 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 OR51A2Q8NGJ7 313 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 OR5M1Q8NGP8 315 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 ZCCHC14Q8WYQ9 949 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms