RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 BAP18Q8IXM2 172 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 OR4K17Q8NGC6 315 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 OR13C9Q8NGT0 318 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 GPR119Q8TDV5 335 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 CA5BP1Q8WTZ4 195 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 NR4A3Q92570 626 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 FOXRED1Q96CU9 486 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF285Q96NJ3 590 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 TGM7Q96PF1 710 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 LPAR4Q99677 370 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PAPOLGQ9BWT3 736 aaKnown RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 NMNAT2Q9BZQ4 307 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PRO1933Q9H354 126 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 LUZP4Q9P127 313 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ASH2LQ9UBL3 628 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 C19orf53Q9UNZ5 99 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 MMP24Q9Y5R2 645 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 F5P12259 2224 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 DCHS1Q96JQ0 3298 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 FREM3P0C091 2139 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 IFITM10A6NMD0 228 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 C1QTNF3-AMACRE9PGA6 284 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 RNASEK-C17orf49H0YIS7 233 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 M0R036 132 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 GPRIN2O60269 458 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 OR10H2O60403 315 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 STK17BO94768 372 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PMS2P2O95744 297 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 TIMP1P01033 207 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 CD8AP01732 235 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 IGHV2-70P01814 119 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 OPN1LWP04000 364 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PRNPP04156 253 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 HLA-DOBP13765 273 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF14P17017 642 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 MDKP21741 143 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ACKR3P25106 362 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PSMD4P55036 377 aaKnown RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ADAM8P78325 824 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 EGR4Q05215 589 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 FMODQ06828 376 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 RPL18Q07020 188 aaKnown RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 SGCGQ13326 291 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 RAB32Q13637 225 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 GGTLC2Q14390 218 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ARHGAP19Q14CB8 494 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 CEBPEQ15744 281 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 HNRNPA1L2Q32P51 320 aaKnown RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ALG10Q5BKT4 473 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 FAM76BQ5HYJ3 339 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 OR2B11Q5JQS5 317 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 TMEM225Q6GV28 225 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF343Q6P1L6 599 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PSRC1Q6PGN9 363 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 MFSD9Q8NBP5 474 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 CCDC54Q8NEL0 328 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 OR2L8Q8NGY9 312 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 STOML3Q8TAV4 291 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 OR8D1Q8WZ84 308 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 FAM3CQ92520 227 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ARL11Q969Q4 196 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 SLC25A44Q96H78 314 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF514Q96K75 400 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 SULT4A1Q9BR01 284 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF426Q9BUY5 554 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 C1orf198Q9H425 327 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 SMOC1Q9H4F8 434 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 BANF2Q9H503 90 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 MKKSQ9NPJ1 570 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PILRAQ9UKJ1 303 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 EMC9Q9Y3B6 208 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PIAS3Q9Y6X2 628 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 URGCP-MRPS24S4R325 110 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 TRBV5-7A0A0A0MS05 114 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 LOC100289279A0A1B0GTE1 492 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 MANSC4A6NHS7 340 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-204ENST00000372246 H0YGG7 62 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 P2RY10O00398 339 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 FGF16O43320 207 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 SRPX2O60687 465 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-204ENST00000372246 OR2F2O95006 317 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 TXNDC12O95881 172 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 SFTPBP07988 381 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 FBP1P09467 338 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 OR13C7P0DN81 318 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 SLC2A1P11166 492 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 CD79AP11912 226 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ALOX5APP20292 161 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ITGA3P26006 1051 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 HTR2CP28335 458 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 CMPK1P30085 196 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 MAP3K8P41279 467 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 NOVA1P51513 510 aaKnown RBP4.84□□□□□ -1.63
ATG4A-204ENST00000372246 TAS2R19P59542 299 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ARF3P61204 181 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-204ENST00000372246 DPTQ07507 201 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 OR2F1Q13607 317 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ELOCQ15369 112 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ANKRD55Q3KP44 614 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ITPRIPL2Q3MIP1 535 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms