RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 OR5M1Q8NGP8 315 aa12.15□□□□□ -0.47
RAPGEF1-201ENST00000372189 FAM213BQ8TBF2 198 aa12.15□□□□□ -0.47
RAPGEF1-201ENST00000372189 PIGMQ9H3S5 423 aa12.15□□□□□ -0.47
RAPGEF1-201ENST00000372189 H7C1C5 153 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 TK1P04183 234 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 GLAP06280 429 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 SMIM6P0DI80 62 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 NAGAP17050 411 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 METAP1P53582 386 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 CTU2Q2VPK5 515 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 REC114Q7Z4M0 266 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 TEX37Q96LM6 180 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 SLC25A21Q9BQT8 299 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 DECR2Q9NUI1 292 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 ZNF831Q5JPB2 1677 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 TMEM129A0AVI4 362 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 FGF17O60258 216 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 GIPP09681 153 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 CPT2P23786 658 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 RBP2P50120 134 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 TEKQ02763 1124 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 TRA2AQ13595 282 aaKnown RBP eCLIP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 C1orf140Q5VVS0 124 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 LPCAT3Q6P1A2 487 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 FBXW12Q6X9E4 464 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 BCORP1Q8N888 145 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 MENTQ9BUN1 341 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 GSX2Q9BZM3 304 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 LIN7BQ9HAP6 207 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 FBXL4Q9UKA2 621 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 A0A1B0GW15 77 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 TMEM200CA6NKL6 621 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 SIGLEC14Q08ET2 396 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 ALKBH1Q13686 389 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 LIPNQ5VXI9 398 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 GDPD3Q7L5L3 318 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 GDF7Q7Z4P5 450 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 MDGA2Q7Z553 956 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 BCDIN3DQ7Z5W3 292 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 YRDCQ86U90 279 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 KLHDC8BQ8IXV7 354 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 APH1AQ96BI3 265 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 SEC22CQ9BRL7 303 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 FAM103A1Q9BTL3 118 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 TMEM59Q9BXS4 323 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 CDS2O95674 445 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 MT-CO3P00414 261 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 CD22P20273 847 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 TEAD1P28347 426 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 SRPXP78539 464 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 ZNF74Q16587 644 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 DUSP5Q16690 384 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 CD300LGQ6UXG3 332 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 PRICKLE2Q7Z3G6 844 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 NHLRC2Q8NBF2 726 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 TSLPQ969D9 159 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 TMEM106AQ96A25 262 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 MSI2Q96DH6 328 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 LOC100289279A0A1B0GTE1 492 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 CYB5BO43169 146 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 BTG2P78543 158 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 EIF3IQ13347 325 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 SLC10A1Q14973 349 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 ZNF813Q6ZN06 617 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 DPY19L2P2Q6ZN68 376 aa12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 NDRG4Q9ULP0 352 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-201ENST00000372189 HMX2A2RU54 273 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 SOHLH1Q5JUK2 328 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 THEM4Q5T1C6 240 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 FAM162BQ5T6X4 162 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 UPRTQ96BW1 309 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 MRGPRX3Q96LB0 322 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 SERGEFQ9UGK8 458 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 CEBPZOSA8MTT3 80 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 OR5H8P0DN80 308 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 OR13C7P0DN81 318 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 ZNF44P15621 663 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 COL9A1P20849 921 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 FAM53BQ14153 422 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 MOGAT2Q3SYC2 334 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 SLC35D3Q5M8T2 416 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 LIMS2Q7Z4I7 341 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 RBMXL3Q8N7X1 1067 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 OR13C6PQ8NH95 151 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 KCNG3Q8TAE7 436 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 TMEM255BQ8WV15 326 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 GABARAPL3Q9BY60 117 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 CHRNA9Q9UGM1 479 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 SRMP19623 302 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 GUSBP11Q6P575 273 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 OVCH1Q7RTY7 1134 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 EXOSC3Q9NQT5 275 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 SLC22A11Q9NSA0 550 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 IL19Q9UHD0 177 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 F6UZH7 168 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 KLK10O43240 276 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 ZNF780AO75290 641 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 TPPP2P59282 170 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms