RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 EDARQ9UNE0 448 aa13.79□□□□□ -0.2
PFDN4-201ENST00000371419 NAV2Q8IVL1 2488 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 ANKRD17O75179 2603 aaKnown RBP13.78□□□□□ -0.2
PFDN4-201ENST00000371419 E7EQL1 145 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 MYL12BO14950 172 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 RER1O15258 196 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 DOK2O60496 412 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 TMCC2O75069 709 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 COX5BP10606 129 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 ZNF182P17025 639 aaPredicted RBP13.78□□□□□ -0.2
PFDN4-201ENST00000371419 LIPAP38571 399 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 ENTPD1P49961 510 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 GDI2P50395 445 aaKnown RBP13.78□□□□□ -0.2
PFDN4-201ENST00000371419 RPS7P62081 194 aaKnown RBP13.78□□□□□ -0.2
PFDN4-201ENST00000371419 HIST1H3AP68431 136 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 HGFACQ04756 655 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 TIMM50Q3ZCQ8 353 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 HIST2H3PS2Q5TEC6 136 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 SLC18B1Q6NT16 456 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 CORO6Q6QEF8 472 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 B3GLCTQ6Y288 498 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 C20orf204Q6ZNR8 217 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 HIST2H3AQ71DI3 136 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 VASH1Q7L8A9 365 aaPredicted RBP13.78□□□□□ -0.2
PFDN4-201ENST00000371419 BCDIN3DQ7Z5W3 292 aaKnown RBP13.78□□□□□ -0.2
PFDN4-201ENST00000371419 LINC00346Q8IVM7 164 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 NANOGP1Q8N7R0 232 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 ZNF611Q8N823 705 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 OR2AJ1Q8NGZ0 328 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 LGALS12Q96DT0 336 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 ZMYND19Q96E35 227 aaPredicted RBP13.78□□□□□ -0.2
PFDN4-201ENST00000371419 WDR76Q9H967 626 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 EXOSC1Q9Y3B2 195 aaKnown RBP13.78□□□□□ -0.2
PFDN4-201ENST00000371419 SPEF1Q9Y4P9 236 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 RTTNQ86VV8 2226 aa13.78□□□□□ -0.2
PFDN4-201ENST00000371419 AIREO43918 545 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 CCL2P13500 99 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 SLC2A5P22732 501 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 HTR1FP30939 366 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 RGS6P49758 472 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 GALK2Q01415 458 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 RAB35Q15286 201 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 SPHARQ15513 63 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 PCK2Q16822 640 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 CCDC92Q53HC0 331 aaPredicted RBP13.77□□□□□ -0.21
PFDN4-201ENST00000371419 TEX30Q5JUR7 227 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 PAMR1Q6UXH9 720 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 LINC00299Q6ZSB3 139 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 NUP37Q8NFH4 326 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 POM121L2Q96KW2 1035 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 INTS14Q96SY0 518 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 DHRS9Q9BPW9 319 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 LIME1Q9H400 295 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 MARCH7Q9H992 704 aa13.77□□□□□ -0.21
PFDN4-201ENST00000371419 GDF2Q9UK05 429 aaPredicted RBP13.77□□□□□ -0.21
PFDN4-201ENST00000371419 LOC100509620A0A075B734 347 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 TMEM129A0AVI4 362 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 C5orf49A4QMS7 147 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 CCRL2O00421 344 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 ZNF593O00488 134 aaPredicted RBP13.76□□□□□ -0.21
PFDN4-201ENST00000371419 SYNGR3O43761 229 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 SPARCP09486 303 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 CCNOP22674 350 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 NR4A1P22736 598 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 HTR5AP47898 357 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 SERPINB10P48595 397 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 SPCS2Q15005 226 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 DGUOKQ16854 277 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 LCN1P1Q5VSP4 162 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 TIGD4Q8IY51 512 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 PAQR4Q8N4S7 273 aaPredicted RBP13.76□□□□□ -0.21
PFDN4-201ENST00000371419 OR1F12Q8NHA8 337 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 SMAP2Q8WU79 429 aaPredicted RBP13.76□□□□□ -0.21
PFDN4-201ENST00000371419 TEAD3Q99594 435 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 HDHD2Q9H0R4 259 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 ISYNA1Q9NPH2 558 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 CA10Q9NS85 328 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 FAIMQ9NVQ4 179 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 ATPIF1Q9UII2 106 aa13.76□□□□□ -0.21
PFDN4-201ENST00000371419 EXOGQ9Y2C4 368 aaKnown RBP13.76□□□□□ -0.21
PFDN4-201ENST00000371419 LSM2Q9Y333 95 aaKnown RBP13.76□□□□□ -0.21
PFDN4-201ENST00000371419 OR6C6A6NF89 314 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 HSMCR30P0CW71 290 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 RPS27P42677 84 aaKnown RBP13.75□□□□□ -0.21
PFDN4-201ENST00000371419 FABP6P51161 128 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 NKX6-1P78426 367 aaPredicted RBP13.75□□□□□ -0.21
PFDN4-201ENST00000371419 MLLT11Q13015 90 aaPredicted RBP13.75□□□□□ -0.21
PFDN4-201ENST00000371419 SNTB2Q13425 540 aaKnown RBP13.75□□□□□ -0.21
PFDN4-201ENST00000371419 ELFN2Q5R3F8 820 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 ZNF544Q6NX49 715 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 CFAP77Q6ZQR2 320 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 MEPCEQ7L2J0 689 aaKnown RBP13.75□□□□□ -0.21
PFDN4-201ENST00000371419 OR6N2Q8NGY6 317 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 OR5M11Q96RB7 305 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 COQ7Q99807 217 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 JAM3Q9BX67 310 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 ST6GALNAC2Q9UJ37 374 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 RAI1Q7Z5J4 1906 aaPredicted RBP13.75□□□□□ -0.21
PFDN4-201ENST00000371419 CSMD2Q7Z408 3487 aa13.75□□□□□ -0.21
PFDN4-201ENST00000371419 CCDC182A6NF36 153 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms