RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 COA3Q9Y2R0 106 aaPredicted RBP11.4□□□□□ -0.59
HCFC1-202ENST00000369984 ORM1P02763 201 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 SELEP16581 610 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 SLC6A12P48065 614 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 ETFDHQ16134 617 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 IQCJQ1A5X6 159 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 CADM3Q8N126 398 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 OR13D1Q8NGV5 346 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 RPUSD4Q96CM3 377 aaKnown RBP11.39□□□□□ -0.59
HCFC1-202ENST00000369984 ZIC5Q96T25 663 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 PMS2P1A4D2B8 440 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 YIF1AO95070 293 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 SLC25A6P12236 298 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 FABP9Q0Z7S8 132 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 PLXDC2Q6UX71 529 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 RELL2Q8NC24 303 aaPredicted RBP11.39□□□□□ -0.59
HCFC1-202ENST00000369984 OR51F2Q8NH61 342 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 RLN3Q8WXF3 142 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 FER1L6-AS2Q96M78 137 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 MS4A8Q9BY19 250 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 RNF150Q9ULK6 438 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 IHHQ14623 411 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 RFPL4AA6NLU0 287 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 RFPL4AL1F8VTS6 287 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 AKR7A3O95154 331 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 IGHV3-9P01782 118 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 RAD52P43351 418 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 ERHP84090 104 aaKnown RBP11.39□□□□□ -0.59
HCFC1-202ENST00000369984 LHFPL2Q6ZUX7 228 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 PGBD5Q8N414 524 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 DYRK2Q92630 601 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 ATOH1Q92858 354 aaPredicted RBP11.39□□□□□ -0.59
HCFC1-202ENST00000369984 EXTL1Q92935 676 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 CRLF2Q9HC73 371 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 CTXN2P0C2S0 81 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 ZNF750Q32MQ0 723 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 SYT14P1Q58G82 188 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 PET117Q6UWS5 81 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 DOK3Q7L591 496 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 ANKRD53Q8N9V6 530 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 TIMD4Q96H15 378 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 STRAPQ9Y3F4 350 aaKnown RBP11.39□□□□□ -0.59
HCFC1-202ENST00000369984 SYT5O00445 386 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 ARPC3O15145 178 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 CHRM2P08172 466 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 QDPRP09417 244 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 C1orf140Q5VVS0 124 aa11.39□□□□□ -0.59
HCFC1-202ENST00000369984 TRIM77I1YAP6 450 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 OR5G3P0C626 314 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 LCN15Q6UWW0 184 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 HLA-CQ95604 372 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 CTRCQ99895 268 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 RTL8AQ9BWD3 113 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 GPR173Q9NS66 373 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 NDUFB11Q9NX14 153 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 MYOFQ9NZM1 2061 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 ZNF354AO60765 605 aaPredicted RBP11.38□□□□□ -0.59
HCFC1-202ENST00000369984 HRH1P35367 487 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 CCL11P51671 97 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 RNF167Q9H6Y7 350 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 PDLIM7Q9NR12 457 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 FITM1A5D6W6 292 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 RGRP47804 291 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 MRPS21P82921 87 aaKnown RBP11.38□□□□□ -0.59
HCFC1-202ENST00000369984 TIGITQ495A1 244 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 OR2D3Q8NGH3 330 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 SPOCK3Q9BQ16 436 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 TINAGL1Q9GZM7 467 aaPredicted RBP11.38□□□□□ -0.59
HCFC1-202ENST00000369984 ZC3H12DA2A288 527 aaKnown RBP11.38□□□□□ -0.59
HCFC1-202ENST00000369984 LRRC3CA6NJW4 275 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 E5RGE8 158 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 PLRG1O43660 514 aaKnown RBP11.38□□□□□ -0.59
HCFC1-202ENST00000369984 GATCO43716 136 aaKnown RBP11.38□□□□□ -0.59
HCFC1-202ENST00000369984 TPPP2P59282 170 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 BPIFB3P59826 476 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 RAB1AP62820 205 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 SLCO4C1Q6ZQN7 724 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 RTL10Q7L3V2 364 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 MAVSQ7Z434 540 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 ZNF687Q8N1G0 1237 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 TEX37Q96LM6 180 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 STACQ99469 402 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 NSG2Q9Y328 171 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 DOCK8Q8NF50 2099 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 POM121BA6NF01 834 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 C5orf52A6NGY3 159 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 ZNF26P17031 533 aaPredicted RBP11.38□□□□□ -0.59
HCFC1-202ENST00000369984 PSMB6P28072 239 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 ASAH1Q13510 395 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 TMEM178AQ8NBL3 297 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 PINX1Q96BK5 328 aaKnown RBP11.38□□□□□ -0.59
HCFC1-202ENST00000369984 ESRP2Q9H6T0 727 aaKnown RBP11.38□□□□□ -0.59
HCFC1-202ENST00000369984 OR1A1Q9P1Q5 309 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 ZNF629Q9UEG4 869 aaPredicted RBP11.38□□□□□ -0.59
HCFC1-202ENST00000369984 ALX3O95076 343 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 NPY1RP25929 384 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 CCKARP32238 428 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 CYB561P49447 251 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 RBP2P50120 134 aa11.38□□□□□ -0.59
HCFC1-202ENST00000369984 SOWAHCQ53LP3 525 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms