RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 RGS7BPQ6MZT1 257 aaPredicted RBP11.97□□□□□ -0.49
TPM3-211ENST00000368531 PLEKHG7Q6ZR37 379 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 LHFPL3Q86UP9 236 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 FBXL14Q8N1E6 418 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 ACBD7Q8N6N7 88 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 NUP37Q8NFH4 326 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 SLC25A40Q8TBP6 338 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 SNX33Q8WV41 574 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 GGHQ92820 318 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 DCLRE1CQ96SD1 692 aaKnown RBP11.97□□□□□ -0.49
TPM3-211ENST00000368531 SYT3Q9BQG1 590 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 MROQ9BYG7 248 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 BCL2L14Q9BZR8 327 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 POFUT1Q9H488 388 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 Q9H521 79 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 PTTG3PQ9NZH4 202 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 PCDHGB5Q9Y5G0 923 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 PCDHGB1Q9Y5G3 927 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 C5orf63A6NC05 138 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 VSTM5A8MXK1 200 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 PTGES3LE9PB15 166 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 TBX1O43435 398 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 RPP14O95059 124 aaKnown RBP11.96□□□□□ -0.49
TPM3-211ENST00000368531 FADS2O95864 444 aaKnown RBP11.96□□□□□ -0.49
TPM3-211ENST00000368531 APOBEC3AP31941 199 aaPredicted RBP11.96□□□□□ -0.49
TPM3-211ENST00000368531 RIDAP52758 137 aaKnown RBP11.96□□□□□ -0.49
TPM3-211ENST00000368531 ZNF121P58317 390 aaPredicted RBP11.96□□□□□ -0.49
TPM3-211ENST00000368531 ACTC1P68032 377 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 ACTA1P68133 377 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 RAB40BQ12829 278 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 ADIPOQQ15848 244 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 SNAI3Q3KNW1 292 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 TP53I3Q53FA7 332 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 DRAM2Q6UX65 266 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 UNQ6126/PRO20091Q6UXV3 157 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 AHSA2Q719I0 299 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 FAM57BQ71RH2 274 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 LRP11Q86VZ4 500 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 ZNF679Q8IYX0 411 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 ZNF611Q8N823 705 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 YIPF7Q8N8F6 280 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 TMEM171Q8WVE6 324 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 APOBEC3DQ96AK3 386 aaPredicted RBP11.96□□□□□ -0.49
TPM3-211ENST00000368531 OR2J1Q9GZK6 312 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 TBCCD1Q9NVR7 557 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 MRPS18AQ9NVS2 196 aaKnown RBP11.96□□□□□ -0.49
TPM3-211ENST00000368531 MRM2Q9UI43 246 aaKnown RBP11.96□□□□□ -0.49
TPM3-211ENST00000368531 DUSP13Q9UII6 198 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 GTF2A1LQ9UNN4 478 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 LAMP3Q9UQV4 416 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 CMAHPQ9Y471 501 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 ABCA4P78363 2273 aa11.96□□□□□ -0.49
TPM3-211ENST00000368531 J3QRE1 110 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 SLC1A7O00341 560 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 CLPTM1O96005 669 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 KRT8P05787 483 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 SOD3P08294 240 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 ADRA2AP08913 450 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 ANOS1P23352 680 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 OTX1P32242 354 aaPredicted RBP11.95□□□□□ -0.5
TPM3-211ENST00000368531 TTKP33981 857 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 SERPINF1P36955 418 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 MPV17P39210 176 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 PRSS12P56730 875 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 RPS23P62266 143 aaKnown RBP11.95□□□□□ -0.5
TPM3-211ENST00000368531 ROM1Q03395 351 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 MVKQ03426 396 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 EGR3Q06889 387 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 HLXQ14774 488 aaPredicted RBP11.95□□□□□ -0.5
TPM3-211ENST00000368531 ALKBH6Q3KRA9 238 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 MUC15Q8N387 334 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 ZNF786Q8N393 782 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 ZNF540Q8NDQ6 660 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 OR5L1Q8NGL2 311 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 PGAM5Q96HS1 289 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 DOK1Q99704 481 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 MRPL37Q9BZE1 423 aaKnown RBP11.95□□□□□ -0.5
TPM3-211ENST00000368531 ZNF442Q9H7R0 627 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 FGF20Q9NP95 211 aaPredicted RBP11.95□□□□□ -0.5
TPM3-211ENST00000368531 SCN3BQ9NY72 215 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 PSORS1C1Q9UIG5 152 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 GNG8Q9UK08 70 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 PLEKHA6Q9Y2H5 1048 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 BAHCC1Q9P281 2608 aa11.95□□□□□ -0.5
TPM3-211ENST00000368531 TMEM269A0A1B0GVZ9 245 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 IRGMA1A4Y4 181 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 EFCAB10A6NFE3 127 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 METTL15A6NJ78 407 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 J3QLW9 94 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 DENRO43583 198 aaKnown RBP11.94□□□□□ -0.5
TPM3-211ENST00000368531 ZNF254O75437 659 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 ATE1O95260 518 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 ZNF19P17023 458 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 GCH1P30793 250 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 PSMB10P40306 273 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 RGS6P49758 472 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 ETV1P50549 477 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 OR12D2P58182 307 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 ST3GAL4Q11206 333 aa11.94□□□□□ -0.5
TPM3-211ENST00000368531 GFOD2Q3B7J2 385 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms