RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SLC30A8Q8IWU4 369 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 Q8N2B8 174 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 BOLLQ8N9W6 283 aaKnown RBP11.9□□□□□ -0.5
VAMP4-202ENST00000367740 EPS8L3Q8TE67 593 aaKnown RBP11.9□□□□□ -0.5
VAMP4-202ENST00000367740 MAP6Q96JE9 813 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 DDOQ99489 341 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 NKX3-1Q99801 234 aaPredicted RBP11.9□□□□□ -0.5
VAMP4-202ENST00000367740 ZNF426Q9BUY5 554 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 WNT10AQ9GZT5 417 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 INIPQ9NRY2 104 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 STX18Q9P2W9 335 aaKnown RBP11.9□□□□□ -0.5
VAMP4-202ENST00000367740 RNF7Q9UBF6 113 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 ANGPT4Q9Y264 503 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 A0A1B0GW55 424 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 A0A1W2PPL8 197 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 OOEPA6NGQ2 149 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 C12orf71A8MTZ7 269 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 J3QW42 95 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 M0R3H8 397 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 FBP2O00757 339 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 SGCEO43556 437 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 NDUFA2O43678 99 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 PF4P02776 101 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 DUX4L2P0CJ85 424 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 DUX4L3P0CJ86 424 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 DUX4L4P0CJ87 422 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 DUX4L5P0CJ88 424 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 DUX4L6P0CJ89 424 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 DUX4L7P0CJ90 424 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 NR2C1P13056 603 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 BGNP21810 368 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 AQP2P41181 271 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 NPTX1Q15818 432 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 LRRC75BQ2VPJ9 315 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 DUX4L9Q6RFH8 374 aaPredicted RBP11.89□□□□□ -0.51
VAMP4-202ENST00000367740 FAM90A1Q86YD7 464 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 DTX3Q8N9I9 347 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 PCYOX1LQ8NBM8 494 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 RASD2Q96D21 266 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 AJUBAQ96IF1 538 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
VAMP4-202ENST00000367740 MCHR1Q99705 422 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 SPATA5L1Q9BVQ7 753 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 FAM234AQ9H0X4 552 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 EMC7Q9NPA0 242 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 INPP5EQ9NRR6 644 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 TMEM100Q9NV29 134 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 DUX4Q9UBX2 424 aa11.89□□□□□ -0.51
VAMP4-202ENST00000367740 TRAV38-1A0A0B4J264 116 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 NPIPB13A6NJU9 1138 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 CPSF4LA6NMK7 179 aaKnown RBP11.88□□□□□ -0.51
VAMP4-202ENST00000367740 NPIPB4C9JG80 1138 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 FAHP16930 419 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 LMO1P25800 156 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 PAX6P26367 422 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 RGS6P49758 472 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 UBE2E1P51965 193 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 ACSM1Q08AH1 577 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 SCRN3Q0VDG4 424 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 FADDQ13158 208 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 TSPYL5Q86VY4 417 aaPredicted RBP11.88□□□□□ -0.51
VAMP4-202ENST00000367740 KRT73Q86Y46 540 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 CMTM4Q8IZR5 234 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 OR51G2Q8NGK0 314 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 MOSPD2Q8NHP6 518 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 TCP10LQ8TDR4 215 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 ZBTB18Q99592 522 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 ALG12Q9BV10 488 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 RAD21L1Q9H4I0 556 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 MEPEQ9NQ76 525 aaPredicted RBP11.88□□□□□ -0.51
VAMP4-202ENST00000367740 TRIM36Q9NQ86 728 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 POLE4Q9NR33 117 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 KAAG1Q9UBP8 84 aa11.88□□□□□ -0.51
VAMP4-202ENST00000367740 OR6C6A6NF89 314 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 SPAG7O75391 227 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 IL6P05231 212 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 BPGMP07738 259 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 DBHP09172 617 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 GUCA1AP43080 201 aaPredicted RBP11.87□□□□□ -0.51
VAMP4-202ENST00000367740 BMXP51813 675 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 CD83Q01151 205 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 ENTPD8Q5MY95 495 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 REEP3Q6NUK4 255 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 LIAT1Q6ZQX7 453 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 DPF1Q92782 380 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 ZNF583Q96ND8 569 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 OR5M11Q96RB7 305 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 DCTN5Q9BTE1 182 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 C20orf27Q9GZN8 174 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 WDR76Q9H967 626 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 NKX1-2Q9UD57 310 aaPredicted RBP11.87□□□□□ -0.51
VAMP4-202ENST00000367740 SLC13A4Q9UKG4 626 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 SLC7A7Q9UM01 511 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 FRAS1Q86XX4 4008 aa11.87□□□□□ -0.51
VAMP4-202ENST00000367740 PRORSD1PA6NEY8 169 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 CLIC1O00299 241 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 ZFPL1O95159 310 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 CHRM2P08172 466 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 TSPAN19P0C672 248 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 HOXB9P17482 250 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms