RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 ZNF561Q8N587 486 aa11.11□□□□□ -0.63
DNMT1-202ENST00000359526 SMIM4Q8WVI0 70 aa11.11□□□□□ -0.63
DNMT1-202ENST00000359526 APH1BQ8WW43 257 aa11.11□□□□□ -0.63
DNMT1-202ENST00000359526 WDFY2Q96P53 400 aa11.11□□□□□ -0.63
DNMT1-202ENST00000359526 DOK1Q99704 481 aa11.11□□□□□ -0.63
DNMT1-202ENST00000359526 TMEM30AQ9NV96 361 aa11.11□□□□□ -0.63
DNMT1-202ENST00000359526 TMEFF2Q9UIK5 374 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-202ENST00000359526 ZNF346Q9UL40 294 aaKnown RBP11.11□□□□□ -0.63
DNMT1-202ENST00000359526 EXO1Q9UQ84 846 aaKnown RBP11.11□□□□□ -0.63
DNMT1-202ENST00000359526 YBX2Q9Y2T7 364 aaKnown RBP11.11□□□□□ -0.63
DNMT1-202ENST00000359526 M0R082 166 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 M0R296 226 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 FGF17O60258 216 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 CISD3P0C7P0 127 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 FGF9P31371 208 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-202ENST00000359526 OR2B8PP59922 312 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 PRAMEF20Q5VT98 475 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 FAM109BQ6ICB4 259 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-202ENST00000359526 STAC2Q6ZMT1 411 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 CDH26Q8IXH8 852 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 CA13Q8N1Q1 262 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 OR2G3Q8NGZ4 309 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 SLC37A2Q8TED4 501 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 PIGTQ969N2 578 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 SARAFQ96BY9 339 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 DHCR7Q9UBM7 475 aaKnown RBP11.1□□□□□ -0.63
DNMT1-202ENST00000359526 SLC23A1Q9UHI7 598 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 GAB2Q9UQC2 676 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 NTNG1Q9Y2I2 539 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 LOXL2Q9Y4K0 774 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 B4GALT3O60512 393 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 IL5P05113 134 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 APEHP13798 732 aaKnown RBP11.1□□□□□ -0.63
DNMT1-202ENST00000359526 CD80P33681 288 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 NKX2-1P43699 371 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-202ENST00000359526 GABRA2P47869 451 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 RAB1AP62820 205 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 NKAIN1Q4KMZ8 207 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 CLEC9AQ6UXN8 241 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 C1orf210Q8IVY1 113 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 C1orf87Q8N0U7 546 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 ZNF321PQ8N8H1 164 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 TTC9Q92623 222 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 SLAMF6Q96DU3 332 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 ZMAT3Q9HA38 289 aaKnown RBP11.1□□□□□ -0.63
DNMT1-202ENST00000359526 C12orf10Q9HB07 376 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 GNG12Q9UBI6 72 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 POMT2Q9UKY4 750 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 R4GMQ9 66 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 ZC3H12DA2A288 527 aaKnown RBP11.1□□□□□ -0.63
DNMT1-202ENST00000359526 OR5H14A6NHG9 310 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 PRRT4C9JH25 899 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 CCSO14618 274 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 DOK2O60496 412 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 TUSC2O75896 110 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 OR2C1O95371 312 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 B3GALT4O96024 378 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 PGFP49763 221 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 OR52W1Q6IF63 320 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 AKR7LQ8NHP1 331 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 RNF150Q9ULK6 438 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 PRRC2BQ5JSZ5 2229 aaKnown RBP11.1□□□□□ -0.63
DNMT1-202ENST00000359526 FITM1A5D6W6 292 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 UPK1AO00322 258 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 PNLIPP16233 465 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 RBP2P50120 134 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 UCNP55089 124 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 COTL1Q14019 142 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 ACKR1Q16570 336 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 LPAL2Q16609 132 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 BAGE3Q86Y29 109 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 BAGE2Q86Y30 109 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 GCNT2Q8N0V5 402 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 CNEP1R1Q8N9A8 125 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 ZNF707Q96C28 371 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-202ENST00000359526 ARHGDIGQ99819 225 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 SLIRPQ9GZT3 109 aaKnown RBP11.1□□□□□ -0.63
DNMT1-202ENST00000359526 TBC1D29Q9UFV1 150 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 MED16Q9Y2X0 877 aa11.1□□□□□ -0.63
DNMT1-202ENST00000359526 MKRN2OSH3BPM6 223 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 ACSM4P0C7M7 580 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 TFAP2EQ6VUC0 442 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 OR2AK2Q8NG84 335 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 TMED6Q8WW62 240 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 INTS12Q96CB8 462 aaKnown RBP11.09□□□□□ -0.63
DNMT1-202ENST00000359526 SLC6A17Q9H1V8 727 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 PXNP49023 591 aaPredicted RBP11.09□□□□□ -0.63
DNMT1-202ENST00000359526 ZNF85Q03923 595 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 FAM209AQ5JX71 171 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 BOD1Q96IK1 185 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 ADAM19Q9H013 955 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 TXNIPQ9H3M7 391 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 SPINT2O43291 252 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 FCMRO60667 390 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 ETHE1O95571 254 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 H2AFB1P0C5Y9 115 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 OR4E1P0C645 316 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 SLC17A1Q14916 467 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 XAF1Q6GPH4 301 aa11.09□□□□□ -0.63
DNMT1-202ENST00000359526 SLC38A9Q8NBW4 561 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms