RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 SMAD4Q13485 552 aaKnown RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 TMEM108Q6UXF1 575 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ANKRD13BQ86YJ7 626 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 MS4A15Q8N5U1 240 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 FITM2Q8N6M3 262 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 OR4B1Q8NGF8 309 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 OR10R2Q8NGX6 335 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 RASD2Q96D21 266 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 MRGPRX2Q96LB1 330 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 PLA2G12AQ9BZM1 189 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 FBXO8Q9NRD0 319 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 CGGBP1Q9UFW8 167 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ADGRB2O60241 1585 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ALKQ9UM73 1620 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ZC3H12DA2A288 527 aaKnown RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 IDSB3KWA1 339 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 PSCAO43653 123 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 IL5P05113 134 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 SOX8P57073 446 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 PAX5Q02548 391 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 INPP5JQ15735 1006 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 C6orf136Q5SQH8 315 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 OR2W3Q7Z3T1 314 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 MFSD9Q8NBP5 474 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 CMASQ8NFW8 434 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 OR1N2Q8NGR9 330 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 AIG1Q9NVV5 245 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 IL17BQ9UHF5 180 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 AK3Q9UIJ7 227 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 PRDM4Q9UKN5 801 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 SPO11Q9Y5K1 396 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 DNAJC25-GNG10A0A024R161 153 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 HOXA3O43365 443 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-203ENST00000357654 CSN3P07498 182 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 CCL2P13500 99 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 FABP4P15090 132 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 HTR2CP28335 458 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 CNN1P51911 297 aaKnown RBP5.28□□□□□ -1.56
BRCA1-203ENST00000357654 GABARAPL2P60520 117 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 GCSAMLQ5JQS6 135 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 ADAM5Q6NVV9 412 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 EBLN2Q6P2I7 272 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 CNIH2Q6PI25 160 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 ZDHHC23Q8IYP9 409 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 OR52H1Q8NGJ2 320 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 OR2T35Q8NGX2 323 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 DTD2Q96FN9 168 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 MUS81Q96NY9 551 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 WDR61Q9GZS3 305 aaKnown RBP5.28□□□□□ -1.56
BRCA1-203ENST00000357654 OR52D1Q9H346 318 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 CCL26Q9Y258 94 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 TIMM10BQ9Y5J6 103 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 TLCD2A6NGC4 264 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 SERINC4A6NH21 518 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 CDRT15L2A8MXV6 281 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 SPRY1O43609 319 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-203ENST00000357654 FABP9Q0Z7S8 132 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 GPNMBQ14956 572 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 CNPY1Q3B7I2 92 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 SLC25A30Q5SVS4 291 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 Q6ZN92 141 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 ZNF573Q86YE8 665 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 ZNF441Q8N8Z8 693 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 OR10P1Q8NGE3 313 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 PRSS3P2Q8NHM4 247 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 SPACA5Q96QH8 159 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 FEVQ99581 238 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 TEX264Q9Y6I9 313 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 ADAMTS13Q76LX8 1427 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 UBE2L5PA0A1B0GUS4 154 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 SMPD2O60906 423 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 MPDU1O75352 247 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 GPR32O75388 356 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 GPR75O95800 540 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 SLC35B1P78383 322 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 RGNQ15493 299 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 UBALD2Q8IYN6 164 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 PLD6Q8N2A8 252 aaKnown RBP5.28□□□□□ -1.56
BRCA1-203ENST00000357654 BCORP1Q8N888 145 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 ANKRD53Q8N9V6 530 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 ZNF420Q8TAQ5 688 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-203ENST00000357654 NUDT8Q8WV74 236 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 DDB2Q92466 427 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 DYRK2Q92630 601 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 VGLL1Q99990 258 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 LHPPQ9H008 270 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 ARHGEF28Q8N1W1 1705 aaKnown RBP5.28□□□□□ -1.56
BRCA1-203ENST00000357654 CAMTA1Q9Y6Y1 1673 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 SHISA8B8ZZ34 492 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 SELENOFO60613 162 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 S100A8P05109 93 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 NKX2-1P43699 371 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-203ENST00000357654 ZNF137PP52743 207 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 CTSCP53634 463 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 SUMO1P63165 101 aaKnown RBP5.28□□□□□ -1.56
BRCA1-203ENST00000357654 KCNJ10P78508 379 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 SMIM21Q3B7S5 101 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 LRRC55Q6ZSA7 311 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 DPPA4Q7L190 304 aa5.28□□□□□ -1.56
BRCA1-203ENST00000357654 OR2T11Q8NH01 316 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms