RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 SLC22A13Q9Y226 551 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 STARD10Q9Y365 291 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 LRP12Q9Y561 859 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 NF1P21359 2839 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 TEP1Q99973 2627 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 ARPC4-TTLL3A0A0A6YYG9 625 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 IGHV2OR16-5A0A0B4J2B6 119 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 PNMA8CA0A1B0GUJ8 204 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ANKRD61A6NGH8 418 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 SHISA9B4DS77 424 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 GPR37O15354 613 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 SGCEO43556 437 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 FAM20BO75063 409 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 RPP14O95059 124 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 RAB36O95755 333 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 LCKP06239 509 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 LYNP07948 512 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 OCM2P0CE71 109 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 OCMP0CE72 109 aaPredicted RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 CBR1P16152 277 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 PCMT1P22061 227 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 CD40P25942 277 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 OTX1P32242 354 aaPredicted RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 EMX1Q04741 257 aaPredicted RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 AQP6Q13520 282 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 SPRNQ5BIV9 151 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 LIPNQ5VXI9 398 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 MEDAGQ5VYS4 303 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ZNF322Q6U7Q0 402 aaPredicted RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 RFPL4BQ6ZWI9 263 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 RNF144BQ7Z419 303 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 KBTBD8Q8NFY9 601 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 OR51A4Q8NGJ6 313 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 NANOS1Q8WY41 292 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 ORAI1Q96D31 301 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 PLPPR2Q96GM1 343 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 CNN2Q99439 309 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 COPS4Q9BT78 406 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 HDHD5Q9BXW7 423 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ELOVL3Q9HB03 270 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 CRNNQ9UBG3 495 aaPredicted RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 WARS2Q9UGM6 360 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 IKZF2Q9UKS7 526 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 TIMM10BQ9Y5J6 103 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 HSPE1-MOB4S4R3N1 261 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ABCD4O14678 606 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ATP6V1G1O75348 118 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 CLPTM1O96005 669 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 CDK1P06493 297 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ACSM4P0C7M7 580 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 KIR2DL3P43628 341 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 SLC6A9P48067 706 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 NAAAQ02083 359 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 RAB40BQ12829 278 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 IRF3Q14653 427 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 NRN1LQ496H8 165 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ELFN2Q5R3F8 820 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 MEX3BQ6ZN04 569 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 GID4Q8IVV7 300 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 SETD9Q8NE22 299 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 C1orf162Q8NEQ5 155 aaPredicted RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 SLC30A7Q8NEW0 376 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 STEAP2Q8NFT2 490 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 OR1F12Q8NHA8 337 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 FNDC8Q8TC99 324 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 GTF3AQ92664 365 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 LYZL4Q96KX0 146 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 C4orf36Q96KX1 117 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ARPC5LQ9BPX5 153 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 FGF20Q9NP95 211 aaPredicted RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 DDX28Q9NUL7 540 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 FRRS1LQ9P0K9 344 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 LAMP5Q9UJQ1 280 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 LSM2Q9Y333 95 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 RPL36Q9Y3U8 105 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 MTORP42345 2549 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 FAM221AA4D161 298 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 VSTM5A8MXK1 200 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 E7EQL1 145 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 J3QLW9 94 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 OR2T7P0C7T2 308 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ZNF19P17023 458 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 MPV17P39210 176 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 HTR5AP47898 357 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ROM1Q03395 351 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 GALEQ14376 348 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 VHLLQ6RSH7 139 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 COLCA1Q6ZS62 124 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 SPARTQ8N0X7 666 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 ACBD7Q8N6N7 88 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 GJC3Q8NFK1 279 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 IL17RDQ8NFM7 739 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 OR13C5Q8NGS8 318 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 OR2T27Q8NH04 317 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 SPRYD4Q8WW59 207 aaPredicted RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 RFKQ969G6 155 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 TMIGD2Q96BF3 282 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 PIK3IP1Q96FE7 263 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 Q96MT0 163 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 OR8B4Q96RC9 309 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms