RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 WBP2Q969T9 261 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SARGQ9BW04 601 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 WNK3Q9BYP7 1800 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 ID4P47928 161 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 TATDN3Q17R31 274 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 TMEM240Q5SV17 173 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SFTPA2Q8IWL1 248 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SFTPA1Q8IWL2 248 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 Q8IYB0 196 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 OR51E1Q8TCB6 317 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 NXF2Q9GZY0 626 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 CXorf36Q9H7Y0 433 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 DUSP22Q9NRW4 184 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 GAR1Q9NY12 217 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 M0QYG6 137 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 CDK2AP1O14519 115 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 MT-ND4LP03901 98 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 BEX5Q5H9J7 111 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 TBPL2Q6SJ96 375 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PLPP7Q8NBV4 271 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 APOBEC3DQ96AK3 386 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 RAB1BQ9H0U4 201 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 FGF22Q9HCT0 170 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SLC35D1Q9NTN3 355 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 MED9Q9NWA0 146 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PPP1R3CQ9UQK1 317 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 YTHDF2Q9Y5A9 579 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 A0A1W2PPC4 97 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 CLDN12P56749 244 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PCBP4P57723 403 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 METRNLQ641Q3 311 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 ETFRF1Q6IPR1 90 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 BTNL8Q6UX41 500 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 RSPO2Q6UXX9 243 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 MOB3BQ86TA1 216 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 CCDC190Q86UF4 302 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PGBD5Q8N414 524 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 OR2G3Q8NGZ4 309 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 OR52N1Q8NH53 320 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 C8orf44Q96CB5 159 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SPACA9Q96E40 222 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 WDFY2Q96P53 400 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 TMEM38AQ9H6F2 299 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SLCO1C1Q9NYB5 712 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SLC23A1Q9UHI7 598 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 B3GALT5Q9Y2C3 310 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF816-ZNF321PA0A0X1KG74 233 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF785A8K8V0 405 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 DNASE2O00115 360 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PPIHO43447 177 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PIAS2O75928 621 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SSTR2P30874 369 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 KIR2DS2P43631 304 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 DHODHQ02127 395 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 RNPS1Q15287 305 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 STEAP1BQ6NZ63 245 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 CA13Q8N1Q1 262 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PFN4Q8NHR9 129 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 TMEM208Q9BTX3 173 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PECRQ9BY49 303 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 MBNL1Q9NR56 388 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 NTNG1Q9Y2I2 539 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 STRAPQ9Y3F4 350 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 HSPB2A8KAH6 182 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 BHLHE40O14503 412 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 CBR3O75828 277 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 B4GALT1P15291 398 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 PCMT1P22061 227 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 NKX2-1P43699 371 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-202ENST00000356435 CNN1P51911 297 aaKnown RBP5.03□□□□□ -1.6
PTPRD-202ENST00000356435 HSPB2Q16082 182 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 ARHGEF39Q8N4T4 335 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 SLC38A9Q8NBW4 561 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 METTL17Q9H7H0 456 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-202ENST00000356435 TAS2R5Q9NYW4 299 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 TAS2R4Q9NYW5 299 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 SLAMF8Q9P0V8 285 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 RNF150Q9ULK6 438 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 PPICP45877 212 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 GZMKP49863 264 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 FABP6P51161 128 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 DSCR4P56555 118 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-202ENST00000356435 SNRPGP62308 76 aaKnown RBP5.03□□□□□ -1.6
PTPRD-202ENST00000356435 RAB1AP62820 205 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 FAM71E1Q6IPT2 247 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 TRNP1Q6NT89 227 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 MS4A6EQ96DS6 147 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 SEH1LQ96EE3 360 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 TMEM200CA6NKL6 621 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 H0Y8X5 98 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 PRR35P0CG20 571 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 SRMP19623 302 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 RPL35P42766 123 aaKnown RBP5.03□□□□□ -1.6
PTPRD-202ENST00000356435 NKX2-5P52952 324 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-202ENST00000356435 FZD2Q14332 565 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 PLA1AQ53H76 456 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF362Q5T0B9 420 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-202ENST00000356435 OR2G6Q5TZ20 316 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 TRAT1Q6PIZ9 186 aa5.03□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF788Q6ZQV5 615 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms