RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CNOT2Q9NZN8 540 aaKnown RBP13.41□□□□□ -0.26
TRIM13-201ENST00000356017 IKZF2Q9UKS7 526 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 FAM20BO75063 409 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 SULT1C4O75897 302 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 IGHA1P01876 353 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 KRT8P05787 483 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 LCKP06239 509 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 PIPP12273 146 aaPredicted RBP13.4□□□□□ -0.26
TRIM13-201ENST00000356017 PRF1P14222 555 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 PRKXP51817 358 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 RIDAP52758 137 aaKnown RBP13.4□□□□□ -0.26
TRIM13-201ENST00000356017 MED21Q13503 144 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 LAIR2Q6ISS4 152 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 RGS7BPQ6MZT1 257 aaPredicted RBP13.4□□□□□ -0.26
TRIM13-201ENST00000356017 VHLLQ6RSH7 139 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 C20orf204Q6ZNR8 217 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 PLEKHG7Q6ZR37 379 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 COLCA1Q6ZS62 124 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 KCTD20Q7Z5Y7 419 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 EGFL6Q8IUX8 553 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 ZNF283Q8N7M2 679 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 OR52I1Q8NGK6 324 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 OR1J1Q8NGS3 322 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 NEUROG1Q92886 237 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 DOK1Q99704 481 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 UBTD1Q9HAC8 227 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 FGF20Q9NP95 211 aaPredicted RBP13.4□□□□□ -0.26
TRIM13-201ENST00000356017 SLCO1C1Q9NYB5 712 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 CMAHPQ9Y471 501 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 LRP12Q9Y561 859 aa13.4□□□□□ -0.26
TRIM13-201ENST00000356017 NGFP01138 241 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 LCATP04180 440 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 CCDC159P0C7I6 412 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 THBS4P35443 961 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 CX3CR1P49238 355 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 FABP6P51161 128 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 SELENOVP59797 346 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 PPP1CBP62140 327 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 ACTA2P62736 377 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 ACTG2P63267 376 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF540Q8NDQ6 660 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 TMEM171Q8WVE6 324 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 JAM3Q9BX67 310 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 OR51B6Q9H340 312 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 PSORS1C1Q9UIG5 152 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 MYRFQ9Y2G1 1151 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 METTL15A6NJ78 407 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 H3BSA7 217 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 PSMD9O00233 223 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 XPNPEP2O43895 674 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 GPRIN2O60269 458 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 TACSTD2P09758 323 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 OR4A8P0C604 315 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 TTKP33981 857 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 SERPINF1P36955 418 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF85Q03923 595 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 MALLQ13021 153 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 GALEQ14376 348 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF829Q3KNS6 432 aaPredicted RBP13.39□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF718Q3SXZ3 478 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 RFPL4BQ6ZWI9 263 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 FAM220AQ7Z4H9 259 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 FBXL14Q8N1E6 418 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 MUC15Q8N387 334 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 RFLNBQ8N5W9 214 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 OR52H1Q8NGJ2 320 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 GGHQ92820 318 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 TMEM80Q96HE8 168 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 TTTY10Q9BZA0 68 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 CHCHD3Q9NX63 227 aaKnown RBP13.39□□□□□ -0.27
TRIM13-201ENST00000356017 DIMT1Q9UNQ2 313 aaKnown RBP13.39□□□□□ -0.27
TRIM13-201ENST00000356017 TPRKBQ9Y3C4 175 aa13.39□□□□□ -0.27
TRIM13-201ENST00000356017 BAHCC1Q9P281 2608 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 TMEM269A0A1B0GVZ9 245 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 ACOD1A6NK06 481 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 SLC1A7O00341 560 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 BMP4P12644 408 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 MYL12AP19105 171 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 GCH1P30793 250 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 EVX1P49640 407 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 MMP16P51512 607 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 PSMA6P60900 246 aaKnown RBP13.38□□□□□ -0.27
TRIM13-201ENST00000356017 ST3GAL4Q11206 333 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 ADIPOQQ15848 244 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 CDONQ4KMG0 1287 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF684Q5T5D7 378 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 AGAP6Q5VW22 663 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 SSX6Q7RTT6 188 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 NAA40Q86UY6 237 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 STX19Q8N4C7 294 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 YIPF7Q8N8F6 280 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 MRPL24Q96A35 216 aaKnown RBP13.38□□□□□ -0.27
TRIM13-201ENST00000356017 ERVK13-1Q9NX77 482 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 MRM2Q9UI43 246 aaKnown RBP13.38□□□□□ -0.27
TRIM13-201ENST00000356017 FBXO9Q9UK97 447 aaPredicted RBP13.38□□□□□ -0.27
TRIM13-201ENST00000356017 BLOC1S6Q9UL45 172 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 STARD10Q9Y365 291 aa13.38□□□□□ -0.27
TRIM13-201ENST00000356017 EXOSC1Q9Y3B2 195 aaKnown RBP13.38□□□□□ -0.27
TRIM13-201ENST00000356017 HEATR1Q9H583 2144 aaKnown RBP13.37□□□□□ -0.27
TRIM13-201ENST00000356017 CADP27708 2225 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms