RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 MMACHCQ9Y4U1 282 aa11.59□□□□□ -0.55
SYNCRIP-201ENST00000355238 SDCBPO00560 298 aaPredicted RBP11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 WNT1P04628 370 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 GLAP06280 429 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 GDF1P27539 372 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 RBP2P50120 134 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 B3GNTL1Q67FW5 361 aaPredicted RBP11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 RPL7L1Q6DKI1 246 aaKnown RBP11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 DND1Q8IYX4 353 aaKnown RBP11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 FAM24BQ8N5W8 94 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 PRO1933Q9H354 126 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 B3GAT1Q9P2W7 334 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 CITO14578 2027 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 A0A087X0M5 115 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 A0A1B0GX30 115 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 TCAPO15273 167 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 SPINT2O43291 252 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 GATCO43716 136 aaKnown RBP11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 CD81P60033 236 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 CAMKMTQ7Z624 323 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 ARHGEF39Q8N4T4 335 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 TRAPPC1Q9Y5R8 145 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZBTB42B2RXF5 422 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 B3GALT4O96024 378 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 PRR35P0CG20 571 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 CCSMST1Q4G0I0 132 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 HSF5Q4G112 596 aaPredicted RBP11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 TCTEX1D1Q8N7M0 179 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 C12orf76Q8N812 135 aaPredicted RBP11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC39A7Q92504 469 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 DVL1O14640 695 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 NKG7Q16617 165 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 CIB3Q96Q77 187 aaPredicted RBP11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 R4GMQ9 66 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC17A2O00624 439 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 GLSO94925 669 aaPredicted RBP11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 NXPH2O95156 264 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 MRM1Q6IN84 353 aaKnown RBP11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 TMEFF1Q8IYR6 380 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 GPR173Q9NS66 373 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 GABRQQ9UN88 632 aa11.58□□□□□ -0.56
SYNCRIP-201ENST00000355238 LIMS3P0CW19 117 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 LIMS4P0CW20 117 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 USF1P22415 310 aaPredicted RBP11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 RTL10Q7L3V2 364 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 ARIH2OSQ8N7S6 290 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 RAB18Q9NP72 206 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 FOXJ3Q9UPW0 622 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 ASB1Q9Y576 335 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 LTBP3Q9NS15 1303 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 PI3P19957 117 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 GABRA4P48169 554 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 PTTG1IPP53801 180 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 LIM2P55344 173 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 PIGPP57054 158 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 LTC4SQ16873 150 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLAMF6Q96DU3 332 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZC3HAV1LQ96H79 300 aaKnown RBP11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 BARHL1Q9BZE3 327 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLCO1B1Q9Y6L6 691 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 MBTPS2O43462 519 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 ABHD16AO95870 558 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 OR5H8P0DN80 308 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 SCAND1P57086 179 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 SSX1Q16384 188 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZNF628Q5EBL2 1059 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 OR2A2Q6IF42 318 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 OR51E1Q8TCB6 317 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 PINX1Q96BK5 328 aaKnown RBP11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 NTNG2Q96CW9 530 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 PRRX2Q99811 253 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZNF426Q9BUY5 554 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 SEMA6CQ9H3T2 930 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 LAMB4A4D0S4 1761 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 CCL5P13501 91 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 HSF1Q00613 529 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 C9orf62Q8N4C0 152 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 LIN7CQ9NUP9 197 aaKnown RBP11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 WSB1Q9Y6I7 421 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 MYADML2A6NDP7 307 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 DSCR3O14972 297 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 HSBP1O75506 76 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 MAT1AQ00266 395 aaKnown RBP11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 SAT2Q96F10 170 aaPredicted RBP11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 FAM210BQ96KR6 192 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC46A2Q9BY10 475 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 GPR160Q9UJ42 338 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 MMP24Q9Y5R2 645 aa11.57□□□□□ -0.56
SYNCRIP-201ENST00000355238 TMEM218A2RU14 115 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 XKRY2A2RUG3 117 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZNF98A6NK75 572 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 C4orf47A7E2U8 309 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 FCER1GP30273 86 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC6A1P30531 599 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 RPL29P47914 159 aaKnown RBP11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 FAM27D1Q5T7N8 215 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 SHISA6Q6ZSJ9 500 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 RTN4IP1Q8WWV3 396 aaPredicted RBP11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 MS4A6EQ96DS6 147 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 CTSFQ9UBX1 484 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms