RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 KHDC3LQ587J8 217 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 PWWP2BQ6NUJ5 590 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 FAM219AQ8IW50 185 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 ATOH8Q96SQ7 321 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 NOSIPQ9Y314 301 aaKnown RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 C5orf52A6NGY3 159 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 POU3F1Q03052 451 aaPredicted RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 GGNBP1Q5YKI7 109 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 PTPN18Q99952 460 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 SYT11Q9BT88 431 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 CD207Q9UJ71 328 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 HES2Q9Y543 173 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 PLXNB2O15031 1838 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 TAF1P21675 1872 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 SLC17A3O00476 420 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 MBTPS2O43462 519 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 MPDU1O75352 247 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 HIST1H1CP16403 213 aaKnown RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 KLRK1P26718 216 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 CD80P33681 288 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 SERF2P84101 59 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 Q7L0L9 218 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 OR4S1Q8NGB4 309 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 RSG1Q9BU20 258 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 LEFTY1O75610 366 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 NDUFB6O95139 128 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 CXCL14O95715 111 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 GAPDHP04406 335 aaKnown RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 MFAP5Q13361 173 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 BVESQ8NE79 360 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 C2CD4CQ8TF44 421 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 ST8SIA1Q92185 356 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 NAA50Q9GZZ1 169 aaKnown RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 OR51M1Q9H341 326 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 UBE2ZQ9H832 354 aaPredicted RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 SLC27A5Q9Y2P5 690 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 CHST2Q9Y4C5 530 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 HOXC11O43248 304 aaPredicted RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 ACTL6AO96019 429 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 SULT1A3P0DMM9 295 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 SULT1A4P0DMN0 295 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 H1FOOQ8IZA3 346 aaPredicted RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 LHX3Q9UBR4 397 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 SLC35E2P0CK97 266 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 IGFBP7Q16270 282 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 FBXO48Q5FWF7 155 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 NLGN4XQ8N0W4 816 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 OR5AU1Q8NGC0 362 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 S1PR3Q99500 378 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 FGF20Q9NP95 211 aaPredicted RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 ACP5P13686 325 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 LMO2P25791 158 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 ABHD17BQ5VST6 288 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 DEFB128Q7Z7B8 93 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 TMEM217Q8N7C4 229 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 OR11L1Q8NGX0 322 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 LMF1Q96S06 567 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 CCNOP22674 350 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 FOXK2Q01167 660 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 CLEC12BQ2HXU8 276 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 FJX1Q86VR8 437 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 CCSO14618 274 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 SCGB1C2P0DMR2 95 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 EPHA1P21709 976 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 PIGFQ07326 219 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 PIP5KL1Q5T9C9 394 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 CARFQ8N187 725 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 OR2M3Q8NG83 312 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 ZNF516Q92618 1163 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 NEIL2Q969S2 332 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 NUDT22Q9BRQ3 303 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 ZDHHC8Q9ULC8 765 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 HS3ST2Q9Y278 367 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 SIRPB1O00241 398 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 GEMIN2O14893 280 aaKnown RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 MMP9P14780 707 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 IL24Q13007 206 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 ACOT4Q8N9L9 421 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 PDXPQ96GD0 296 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 FOXN4Q96NZ1 517 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 DOCK3Q8IZD9 2030 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 MAN2B1O00754 1011 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 RPS24P62847 133 aaKnown RBP7.35□□□□□ -1.23
HTT-201ENST00000355072 TXNDC8Q6A555 127 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 NAT8BQ9UHF3 227 aa7.35□□□□□ -1.23
HTT-201ENST00000355072 ATG2BQ96BY7 2078 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 NRXN3Q9Y4C0 1643 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 GALR2O43603 387 aaPredicted RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 SSSCA1O60232 199 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 OR10J4P0C629 311 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 EIF3IQ13347 325 aaKnown RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 CDHR3Q6ZTQ4 885 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 DOLPP1Q86YN1 238 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 NAGSQ8N159 534 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 GABRG1Q8N1C3 465 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 GPR62Q9BZJ7 368 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 ACACAQ13085 2346 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 A0A1W2PN81 502 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 DBX1A6NMT0 343 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 SOD2P04179 222 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms