RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SEMA5BQ9P283 1151 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 GPR160Q9UJ42 338 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 GDF2Q9UK05 429 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ETV7Q9Y603 341 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 FXYD6-FXYD2A0A087WZ82 144 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 IGKV1-9A0A0C4DH69 117 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 BLACEA4D250 179 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 LIPT2A6NK58 231 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 CREBL2O60519 120 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 EIF4E2O60573 245 aaKnown RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 DKK1O94907 266 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 OR4E1P0C645 316 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 SEC61A1P61619 476 aaKnown RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 HNRNPKP61978 463 aaKnown RBP eCLIP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 CCL7P80098 99 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 HSF1Q00613 529 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 RASGEF1BQ0VAM2 473 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 BIKQ13323 160 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF260Q3ZCT1 412 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 LRRC37A5PQ49AS3 106 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 PRAMEF20Q5VT98 475 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 BAIAP2L2Q6UXY1 529 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 OR1S1Q8NH92 325 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 OR51E1Q8TCB6 317 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF75AQ96N20 296 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 GSX2Q9BZM3 304 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ACTR6Q9GZN1 396 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 CHRNA10Q9GZZ6 450 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 FXYD6Q9H0Q3 95 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 C1orf198Q9H425 327 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 C12orf10Q9HB07 376 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 PRDM6Q9NQX0 595 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 SERINC1Q9NRX5 453 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 CYB5R1Q9UHQ9 305 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 R4GMQ9 66 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 TRBV11-1A0A0K0K1C0 115 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 LOC390937A0A1W2PQ73 354 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PMS2P1A4D2B8 440 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 MFSD2BA6NFX1 497 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 NUPL2O15504 423 aaKnown RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 SOCS1O15524 211 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 OR6A2O95222 327 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 IL5P05113 134 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 GLB1P16278 677 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PRSS3P35030 304 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 CAPZA2P47755 286 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 TMEM50BP56557 158 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 RBMS2Q15434 407 aaKnown RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 C3orf33Q6P1S2 294 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 SLC29A4Q7RTT9 530 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 NUP54Q7Z3B4 507 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 LUZP2Q86TE4 346 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PLPP5Q8NEB5 264 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 MAFIPQ8WZ33 124 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 LYZL4Q96KX0 146 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 SPSB2Q99619 263 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 CST11Q9H112 138 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PROK2Q9HC23 129 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 KLHL13Q9P2N7 655 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 UBQLN2Q9UHD9 624 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 FREM1Q5H8C1 2179 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 CPED1A4D0V7 1026 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 OR6C65A6NJZ3 312 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF205O95201 554 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 SPDEFO95238 335 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PDGFBP01127 241 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 HOXD4P09016 255 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 GIPP09681 153 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 GABRA1P14867 456 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PI3P19957 117 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 MPGP29372 298 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 OR3A4PP47883 348 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 SLC6A8P48029 635 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 RIDAP52758 137 aaKnown RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 CLDN6P56747 220 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 DHRS2Q13268 280 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PLPPR5Q32ZL2 321 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 SCGB2B2Q4G0G5 96 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF468Q5VIY5 522 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 HLA-DQA1Q5Y7H0 255 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 C5orf24Q7Z6I8 188 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 GPAT4Q86UL3 456 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 FJX1Q86VR8 437 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 CCDC28AQ8IWP9 274 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 ST8SIA4Q92187 359 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 AQP3Q92482 292 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 DAZLQ92904 295 aaKnown RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 SLAMF6Q96DU3 332 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 MED30Q96HR3 178 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PHF7Q9BWX1 381 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 BANF2Q9H503 90 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 RPH3AQ9Y2J0 694 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 B3GALT1Q9Y5Z6 326 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 KIAA1549Q9HCM3 1950 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 TNRC6BQ9UPQ9 1833 aaKnown RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 IGHV5-10-1A0A0J9YXX1 117 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 NAP1L6A6NFF2 107 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 MT-ATP6P00846 226 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 AMY2AP04746 511 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms