RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 LINC01555Q8NAE3 123 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 BARX1Q9HBU1 254 aaPredicted RBP9.84□□□□□ -0.83
CLCN6-202ENST00000346436 KCNMB2Q9Y691 235 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 OR6C6A6NF89 314 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 GPRIN2O60269 458 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 MEF2DQ14814 521 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 THEM4Q5T1C6 240 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 LIPNQ5VXI9 398 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 TP53I13Q8NBR0 393 aaPredicted RBP9.84□□□□□ -0.83
CLCN6-202ENST00000346436 OR6F1Q8NGZ6 308 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 RIMS4Q9H426 269 aaPredicted RBP9.84□□□□□ -0.83
CLCN6-202ENST00000346436 WDR76Q9H967 626 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 GCM1Q9NP62 436 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 OR2T7P0C7T2 308 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 SRMP19623 302 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 ADH6P28332 368 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 MRPS10P82664 201 aaKnown RBP9.84□□□□□ -0.83
CLCN6-202ENST00000346436 FAM76BQ5HYJ3 339 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 OR5M1Q8NGP8 315 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 OR2T27Q8NH04 317 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 WWTR1Q9GZV5 400 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 GPATCH2Q9NW75 528 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 A0A0A6YYD5 115 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 TMEM212A6NML5 194 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 PRSS44E7EML9 344 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 ST8SIA5O15466 376 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 S100PP25815 95 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 RPL27P61353 136 aaKnown RBP9.84□□□□□ -0.83
CLCN6-202ENST00000346436 GK2Q14410 553 aaPredicted RBP9.84□□□□□ -0.83
CLCN6-202ENST00000346436 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.84□□□□□ -0.83
CLCN6-202ENST00000346436 GLB1L2Q8IW92 636 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 DAZAP1Q96EP5 407 aaKnown RBP9.84□□□□□ -0.83
CLCN6-202ENST00000346436 SEC22AQ96IW7 307 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 DDOQ99489 341 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 MOB1AQ9H8S9 216 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 ASF1BQ9NVP2 202 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 ONECUT1Q9UBC0 465 aa9.84□□□□□ -0.83
CLCN6-202ENST00000346436 TDRD15B5MCY1 1934 aaKnown RBP9.84□□□□□ -0.83
CLCN6-202ENST00000346436 ARRDC5A6NEK1 342 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 K7EQM0 130 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 TNFSF11O14788 317 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 SOD1P00441 154 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 ZXDCQ2QGD7 858 aaPredicted RBP9.83□□□□□ -0.84
CLCN6-202ENST00000346436 PDLIM3Q53GG5 364 aaPredicted RBP9.83□□□□□ -0.84
CLCN6-202ENST00000346436 KANSL1Q7Z3B3 1105 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 KDM8Q8N371 416 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 OR51D1Q8NGF3 324 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 KCNG3Q8TAE7 436 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 KCTD12Q96CX2 325 aaKnown RBP9.83□□□□□ -0.84
CLCN6-202ENST00000346436 SAV1Q9H4B6 383 aaPredicted RBP9.83□□□□□ -0.84
CLCN6-202ENST00000346436 AMMECR1Q9Y4X0 333 aaPredicted RBP9.83□□□□□ -0.84
CLCN6-202ENST00000346436 A0A087WV62 115 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 C5orf49A4QMS7 147 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 M0R036 132 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 ALX3O95076 343 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 C1QBP02746 253 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 CYC1P08574 325 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 PTHLHP12272 177 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 COL9A1P20849 921 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 BRS3P32247 399 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 ZNF83P51522 516 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 OPCMLQ14982 345 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 PRSS42Q7Z5A4 293 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 SLC35G3Q8N808 338 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 OR52I2Q8NH67 350 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 NT5CQ8TCD5 201 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 C20orf141Q9NUB4 165 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 AKAIN1P0CW23 69 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 BDKRB2P30411 391 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 HACD4Q5VWC8 232 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 RHBDD2Q6NTF9 364 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 WDR88Q6ZMY6 472 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 PLPP7Q8NBV4 271 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 OR8D4Q8NGM9 314 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 ING1Q9UK53 422 aaPredicted RBP9.83□□□□□ -0.84
CLCN6-202ENST00000346436 GPR157Q5UAW9 335 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 TMEM65Q6PI78 240 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 ZNF574Q6ZN55 896 aaPredicted RBP9.83□□□□□ -0.84
CLCN6-202ENST00000346436 RNF165Q6ZSG1 346 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 SULF2Q8IWU5 870 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 DDA1Q9BW61 102 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 SLC26A1Q9H2B4 701 aa9.83□□□□□ -0.84
CLCN6-202ENST00000346436 KIR2DS1A0A191URI9 304 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 PATE3B3GLJ2 98 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 ZNF736B4DX44 427 aaPredicted RBP9.82□□□□□ -0.84
CLCN6-202ENST00000346436 M0QYG6 137 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 YIF1AO95070 293 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 KNG1P01042 644 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 ETV6P41212 452 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 KIR2DS4P43632 304 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 EMDP50402 254 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 PCBP3P57721 371 aaKnown RBP9.82□□□□□ -0.84
CLCN6-202ENST00000346436 KIR2DS1Q14954 304 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 RHEBQ15382 184 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 ARHGAP11BQ3KRB8 267 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 AKR1C8PQ5T2L2 129 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 HEPHL1Q6MZM0 1159 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 ANKRD16Q6P6B7 361 aa9.82□□□□□ -0.84
CLCN6-202ENST00000346436 FAM199XQ6PEV8 388 aaPredicted RBP9.82□□□□□ -0.84
CLCN6-202ENST00000346436 ABI3BPQ7Z7G0 1075 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms