RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 C1orf198Q9H425 327 aa19.02■□□□□ 0.63
CCDC38-201ENST00000344280 FARSAQ9Y285 508 aaKnown RBP19.02■□□□□ 0.63
CCDC38-201ENST00000344280 SULT1C2O00338 296 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 TRAF3IP2O43734 574 aaPredicted RBP19.01■□□□□ 0.63
CCDC38-201ENST00000344280 AMY2AP04746 511 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 CSN2P05814 226 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 MSX1P28360 303 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 BDKRB2P30411 391 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 HLA-BQ31612 363 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 C3orf33Q6P1S2 294 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 TMED4Q7Z7H5 227 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 NKAIN3Q8N8D7 197 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 SPACA9Q96E40 222 aaPredicted RBP19.01■□□□□ 0.63
CCDC38-201ENST00000344280 MAB21L2Q9Y586 359 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 SDK2Q58EX2 2172 aa19.01■□□□□ 0.63
CCDC38-201ENST00000344280 RAB27BO00194 218 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 POU3F2P20265 443 aaPredicted RBP19■□□□□ 0.63
CCDC38-201ENST00000344280 CLDN6P56747 220 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 SLC22A6Q4U2R8 563 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 THEM4Q5T1C6 240 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 PHF19Q5T6S3 580 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 KLHL24Q6TFL4 600 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 C17orf107Q6ZR85 190 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 CHMP1BQ7LBR1 199 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 NOXO1Q8NFA2 376 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 OR13C9Q8NGT0 318 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 ANGPTL6Q8NI99 470 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 OR51E1Q8TCB6 317 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 TMPRSS13Q9BYE2 586 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 DEFB126Q9BYW3 111 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 SLC5A6Q9Y289 635 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 ARPC4P59998 168 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 MRPL14Q6P1L8 145 aaKnown RBP19■□□□□ 0.63
CCDC38-201ENST00000344280 COMMD7Q86VX2 200 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 SPACA5Q96QH8 159 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 SCPEP1Q9HB40 452 aa19■□□□□ 0.63
CCDC38-201ENST00000344280 TMEM82A0PJX8 343 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 F5H5P2 479 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 CYB5AP00167 134 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 OR4E1P0C645 316 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 PRKXP51817 358 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 SEC61A1P61619 476 aaKnown RBP18.99■□□□□ 0.63
CCDC38-201ENST00000344280 TMEM176BQ3YBM2 270 aaPredicted RBP18.99■□□□□ 0.63
CCDC38-201ENST00000344280 GVQW1Q8N7I0 195 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 OR1M1Q8NGA1 313 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 SLC6A7Q99884 636 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 GSX2Q9BZM3 304 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 ZNF319Q9P2F9 582 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 FBXO4Q9UKT5 387 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 CHCHD2Q9Y6H1 151 aaPredicted RBP18.99■□□□□ 0.63
CCDC38-201ENST00000344280 A0A1B0GTI1 187 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 ZNF736B4DX44 427 aaPredicted RBP18.99■□□□□ 0.63
CCDC38-201ENST00000344280 ONECUT2O95948 504 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 IGHG1P01857 330 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 ZNF250P15622 560 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 QRFPP83859 136 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 NKPD1Q17RQ9 610 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 SCGB2B2Q4G0G5 96 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 SLC22A8Q8TCC7 542 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 AQP3Q92482 292 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 CYYR1Q96J86 154 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 PRO3102Q9H379 93 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 ASH2LQ9UBL3 628 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 POLR1DQ9Y2S0 133 aa18.99■□□□□ 0.63
CCDC38-201ENST00000344280 FXYD6-FXYD2A0A087WZ82 144 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 SMAD9O15198 467 aaKnown RBP18.98■□□□□ 0.63
CCDC38-201ENST00000344280 RER1O15258 196 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 VSIG8P0DPA2 414 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 ZNF260Q3ZCT1 412 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 ATPAF1Q5TC12 328 aaPredicted RBP18.98■□□□□ 0.63
CCDC38-201ENST00000344280 CD163Q86VB7 1156 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 CCDC28AQ8IWP9 274 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 OR13C8Q8NGS7 320 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 PTX4Q96A99 478 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 FXYD6Q9H0Q3 95 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 CD74P04233 296 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 MELTFP08582 738 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 ABOP16442 354 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 HSD11B1P28845 292 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 GPR85P60893 370 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 NHLRC3Q5JS37 347 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 FAM209AQ5JX71 171 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 C11orf88Q6PI97 169 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 C3P1Q6ZMU1 363 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 FJX1Q86VR8 437 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 BPIFB2Q8N4F0 458 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 SLC26A1Q9H2B4 701 aa18.98■□□□□ 0.63
CCDC38-201ENST00000344280 LIPCP11150 499 aa18.97■□□□□ 0.63
CCDC38-201ENST00000344280 HLXQ14774 488 aaPredicted RBP18.97■□□□□ 0.63
CCDC38-201ENST00000344280 OR52W1Q6IF63 320 aa18.97■□□□□ 0.63
CCDC38-201ENST00000344280 ELP5Q8TE02 316 aa18.97■□□□□ 0.63
CCDC38-201ENST00000344280 NUDCD2Q8WVJ2 157 aa18.97■□□□□ 0.63
CCDC38-201ENST00000344280 FOXRED1Q96CU9 486 aaPredicted RBP18.97■□□□□ 0.63
CCDC38-201ENST00000344280 ALX4Q9H161 411 aaPredicted RBP18.97■□□□□ 0.63
CCDC38-201ENST00000344280 ZNF230Q9UIE0 474 aaPredicted RBP18.97■□□□□ 0.63
CCDC38-201ENST00000344280 RAB22AQ9UL26 194 aa18.97■□□□□ 0.63
CCDC38-201ENST00000344280 LOC100509620A0A075B734 347 aa18.97■□□□□ 0.63
CCDC38-201ENST00000344280 A0A0A6YYH2 397 aa18.97■□□□□ 0.63
CCDC38-201ENST00000344280 A6NJ64 397 aa18.97■□□□□ 0.63
CCDC38-201ENST00000344280 I3L521 148 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms