RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 OTX2P32243 289 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 PPICP45877 212 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 PPP1R1AQ13522 171 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 MRPL41Q8IXM3 137 aaKnown RBP13.42□□□□□ -0.26
RRP1B-201ENST00000340648 LGI3Q8N145 548 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 OR56B2PQ8NGI1 322 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 OR51A4Q8NGJ6 313 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 SFT2D1Q8WV19 159 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 TXNIPQ9H3M7 391 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 NECAP2Q9NVZ3 263 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 ARID2Q68CP9 1835 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 CTDSPLO15194 276 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 NKX2-2O95096 273 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 IGF2P01344 180 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 SSX2Q16385 188 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 BATF2Q8N1L9 274 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 CLEC1AQ8NC01 280 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 OR1S2Q8NGQ3 325 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 OR13C8Q8NGS7 320 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 CMBLQ96DG6 245 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 NUDT9Q9BW91 350 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 ZCCHC4Q9H5U6 513 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 GPR84Q9NQS5 396 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 CA10Q9NS85 328 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 SERGEFQ9UGK8 458 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 PADI1Q9ULC6 663 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 LINC01553A4QN01 128 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 C9orf135Q5VTT2 229 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 UQCC3Q6UW78 93 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 TERB2Q8NHR7 220 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 C4orf45Q96LM5 186 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 GHITMQ9H3K2 345 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 C12orf10Q9HB07 376 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 G3V3Y1 287 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 HBE1P02100 147 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 LIMS1P48059 325 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 MRPL49Q13405 166 aaKnown RBP13.41□□□□□ -0.26
RRP1B-201ENST00000340648 PRSS53Q2L4Q9 553 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 PARM1Q6UWI2 310 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 TMPPEQ6ZT21 453 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 AKR1E2Q96JD6 320 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 MMP25Q9NPA2 562 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 LRP12Q9Y561 859 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 TIMM8BQ9Y5J9 83 aaPredicted RBP13.41□□□□□ -0.26
RRP1B-201ENST00000340648 LOC102725191A0A1B0GVB3 256 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 TRIM64BA6NI03 449 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 ST8SIA3O43173 380 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 LRP3O75074 770 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 TXNDC12O95881 172 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 ELAVL1Q15717 326 aaKnown RBP13.41□□□□□ -0.26
RRP1B-201ENST00000340648 ZXDCQ2QGD7 858 aaPredicted RBP13.41□□□□□ -0.26
RRP1B-201ENST00000340648 MRM1Q6IN84 353 aaKnown RBP13.41□□□□□ -0.26
RRP1B-201ENST00000340648 SSX9Q7RTT3 188 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 MKXQ8IYA7 352 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 C2orf50Q96LR7 162 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 OPN4Q9UHM6 478 aa13.41□□□□□ -0.26
RRP1B-201ENST00000340648 MRPS2Q9Y399 296 aaKnown RBP13.41□□□□□ -0.26
RRP1B-201ENST00000340648 TLCD2A6NGC4 264 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 H7C1Q1 480 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 ARPC3O15145 178 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 OGG1O15527 345 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 LILRB5O75023 590 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 WNT11O96014 354 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 SFTA3P0C7M3 94 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 MRPS21P82921 87 aaKnown RBP13.4□□□□□ -0.26
RRP1B-201ENST00000340648 B3GNTL1Q67FW5 361 aaPredicted RBP13.4□□□□□ -0.26
RRP1B-201ENST00000340648 DOK3Q7L591 496 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 VN1R4Q7Z5H5 301 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 OR6K3Q8NGY3 331 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 PBOV1Q9GZY1 135 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 SUSD2Q9UGT4 822 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 TPPPO94811 219 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 S100A8P05109 93 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 ECI1P42126 302 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 F2RL1P55085 397 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 HTRA4P83105 476 aaPredicted RBP13.4□□□□□ -0.26
RRP1B-201ENST00000340648 ANKRD33Q7Z3H0 272 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 FAM96BQ9Y3D0 163 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 TRIP12Q14669 1992 aaPredicted RBP13.4□□□□□ -0.26
RRP1B-201ENST00000340648 GPR31O00270 319 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 ZNF749O43361 778 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 DUSP2Q05923 314 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 TUSC1Q2TAM9 212 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 HIST2H3AQ71DI3 136 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 GPR119Q8TDV5 335 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 SHDQ96IW2 340 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 KCNJ15Q99712 375 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 CHST11Q9NPF2 352 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 PCM1Q15154 2024 aa13.4□□□□□ -0.26
RRP1B-201ENST00000340648 ZFP92A6NM28 416 aa13.4□□□□□ -0.27
RRP1B-201ENST00000340648 SLC25A1P53007 311 aa13.4□□□□□ -0.27
RRP1B-201ENST00000340648 ZIC1Q15915 447 aa13.4□□□□□ -0.27
RRP1B-201ENST00000340648 HAGHQ16775 308 aa13.4□□□□□ -0.27
RRP1B-201ENST00000340648 VWA2Q5GFL6 755 aa13.4□□□□□ -0.27
RRP1B-201ENST00000340648 SHEQ5VZ18 495 aa13.4□□□□□ -0.27
RRP1B-201ENST00000340648 SLC16A14Q7RTX9 510 aa13.4□□□□□ -0.27
RRP1B-201ENST00000340648 LHFPL5Q8TAF8 219 aa13.4□□□□□ -0.27
RRP1B-201ENST00000340648 CDCA3Q99618 268 aaPredicted RBP13.4□□□□□ -0.27
RRP1B-201ENST00000340648 SLC5A6Q9Y289 635 aa13.4□□□□□ -0.27
RRP1B-201ENST00000340648 DSPPQ9NZW4 1301 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms