RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RAB31Q13636 194 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 TBR1Q16650 682 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 GNB4Q9HAV0 340 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 PARD6AQ9NPB6 346 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 NRIP3Q9NQ35 241 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 OR5V1Q9UGF6 321 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 TMBIM6P55061 237 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 TLE1Q04724 770 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 TMEM81Q6P7N7 255 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 OR52I1Q8NGK6 324 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 RDH5Q92781 318 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 SLC35B4Q969S0 331 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 ANKRD60Q9BZ19 345 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 SAP30LQ9HAJ7 183 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 HINT3Q9NQE9 182 aaKnown RBP11.45□□□□□ -0.58
LIN54-201ENST00000340417 ACOXLQ9NUZ1 547 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 SMPD2O60906 423 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 CCNKO75909 580 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 C1QAP02745 245 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 GLAP06280 429 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 CDK2P24941 298 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 S100A7P31151 101 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 GPM6AP51674 278 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 ZNF133P52736 654 aaPredicted RBP11.45□□□□□ -0.58
LIN54-201ENST00000340417 TAS2R46P59540 309 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 GNB1P62873 340 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 EGR3Q06889 387 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 SMN1Q16637 294 aaKnown RBP11.45□□□□□ -0.58
LIN54-201ENST00000340417 GDPGP1Q6ZNW5 385 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 PLPP7Q8NBV4 271 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 OR6K3Q8NGY3 331 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 MSI2Q96DH6 328 aaKnown RBP11.45□□□□□ -0.58
LIN54-201ENST00000340417 ZNF764Q96H86 408 aaPredicted RBP11.45□□□□□ -0.58
LIN54-201ENST00000340417 C4orf45Q96LM5 186 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 UCN2Q96RP3 112 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 UBL7Q96S82 380 aaPredicted RBP11.45□□□□□ -0.58
LIN54-201ENST00000340417 SPIN2AQ99865 258 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 SPIN2BQ9BPZ2 258 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 R4GMQ9 66 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 FXYD6-FXYD2A0A087WZ82 144 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 LIPT2A6NK58 231 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 PATE4P0C8F1 98 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 HEPHL1Q6MZM0 1159 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 OR8B3Q8NGG8 313 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 OR8B2Q96RD0 313 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 FXYD6Q9H0Q3 95 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 ZCCHC4Q9H5U6 513 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 LIN7BQ9HAP6 207 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 ING1Q9UK53 422 aaPredicted RBP11.45□□□□□ -0.58
LIN54-201ENST00000340417 TPRP12270 2363 aaKnown RBP11.45□□□□□ -0.58
LIN54-201ENST00000340417 APC2O95996 2303 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 LCTP09848 1927 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 IGFBP1P08833 259 aaPredicted RBP11.44□□□□□ -0.58
LIN54-201ENST00000340417 CA6P23280 308 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 ZNF81P51508 661 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 ZFAND1Q8TCF1 268 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 ZG16BQ96DA0 208 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 OR14A2Q96R54 314 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 PTPN6P29350 595 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 POLR2IP36954 125 aaKnown RBP11.44□□□□□ -0.58
LIN54-201ENST00000340417 MSMO1Q15800 293 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 HIKESHIQ53FT3 197 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 SECTM1Q8WVN6 248 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 ASF1BQ9NVP2 202 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 CACNA1GO43497 2377 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 BRWD1Q9NSI6 2320 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 TRGV10A0A0A0MS01 117 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 A0A1W2PQL4 384 aaPredicted RBP11.44□□□□□ -0.58
LIN54-201ENST00000340417 SNCAP37840 140 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 GGTLC2Q14390 218 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 LRRC37A5PQ49AS3 106 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 GLYATL3Q5SZD4 288 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 FBXW12Q6X9E4 464 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 CCL19Q99731 98 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 SIRT5Q9NXA8 310 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 DTX4Q9Y2E6 619 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 SPTA1P02549 2419 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 OR1M1Q8NGA1 313 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 KIF25Q9UIL4 384 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 THADAQ6YHU6 1953 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 ZFP36L1Q07352 338 aaKnown RBP11.44□□□□□ -0.58
LIN54-201ENST00000340417 BEX5Q5H9J7 111 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 ACSM5Q6NUN0 579 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 CFAP77Q6ZQR2 320 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 LILRB2Q8N423 598 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 OR6X1Q8NH79 312 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 PLAC1Q9HBJ0 212 aa11.44□□□□□ -0.58
LIN54-201ENST00000340417 DIMT1Q9UNQ2 313 aaKnown RBP11.44□□□□□ -0.58
LIN54-201ENST00000340417 AQP7P3A6NL99 342 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 SELENOPP49908 381 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 ATXN7L3Q14CW9 347 aaPredicted RBP11.43□□□□□ -0.58
LIN54-201ENST00000340417 INO80CQ6PI98 192 aaPredicted RBP11.43□□□□□ -0.58
LIN54-201ENST00000340417 DRAM2Q6UX65 266 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 OR10K1Q8NGX5 313 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 SNAPC3Q92966 411 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 ABHD6Q9BV23 337 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 CHRNA10Q9GZZ6 450 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 C1orf123Q9NWV4 160 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 TAS2R4Q9NYW5 299 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 PTTG2Q9NZH5 202 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms