RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TUBG1P23258 451 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 NAA10P41227 235 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-201ENST00000340074 RGS6P49758 472 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 PSG7Q13046 419 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 NXNL2Q5VZ03 156 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 COLCA1Q6ZS62 124 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 SHFQ7M4L6 423 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 CIARTQ8N365 385 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-201ENST00000340074 OR5L1Q8NGL2 311 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 SNX33Q8WV41 574 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 NEU4Q8WWR8 484 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-201ENST00000340074 SPTSSAQ969W0 71 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 APOBEC3DQ96AK3 386 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-201ENST00000340074 ZNF799Q96GE5 643 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 COG8Q96MW5 612 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 AMELYQ99218 206 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 COPS4Q9BT78 406 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 ABHD6Q9BV23 337 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 C1QTNF5Q9BXJ0 243 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 DLL4Q9NR61 685 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 TUBG2Q9NRH3 451 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 PTTG3PQ9NZH4 202 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 H7C1Q1 480 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 MRPL3P09001 348 aaKnown RBP13.03□□□□□ -0.32
UBE3B-201ENST00000340074 ANPEPP15144 967 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 SLC6A9P48067 706 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 TPTEP56180 551 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 HLXQ14774 488 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-201ENST00000340074 RCN1Q15293 331 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 TAF13Q15543 124 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 MOGQ16653 247 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 AADACL4Q5VUY2 407 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 CLEC2AQ6UVW9 174 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 OTOSQ8NHW6 89 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 THEM6Q8WUY1 208 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 GTF3AQ92664 365 aaKnown RBP13.03□□□□□ -0.32
UBE3B-201ENST00000340074 CMBLQ96DG6 245 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 KCNJ15Q99712 375 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 TOR3AQ9H497 397 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 H2AFY2Q9P0M6 372 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-201ENST00000340074 TANC2Q9HCD6 1990 aa13.03□□□□□ -0.32
UBE3B-201ENST00000340074 IGHV4-30-2A0A087WSY4 118 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 C17orf100A8MU93 164 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 TIMM8AO60220 97 aaPredicted RBP13.02□□□□□ -0.33
UBE3B-201ENST00000340074 LCATP04180 440 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 DAOP14920 347 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 OTX1P32242 354 aaPredicted RBP13.02□□□□□ -0.33
UBE3B-201ENST00000340074 MMP15P51511 669 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 HCCSP53701 268 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 DSCR9P59020 149 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 LCN1P1Q5VSP4 162 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 MEPCEQ7L2J0 689 aaKnown RBP13.02□□□□□ -0.33
UBE3B-201ENST00000340074 SLC16A9Q7RTY1 509 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 FAM81AQ8TBF8 368 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 RNF133Q8WVZ7 376 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 FAM168AQ92567 244 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 HRASLS5Q96KN8 279 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 MBOAT4Q96T53 435 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 RHNO1Q9BSD3 238 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 PURGQ9UJV8 347 aaKnown RBP13.02□□□□□ -0.33
UBE3B-201ENST00000340074 KLHDC2Q9Y2U9 406 aa13.02□□□□□ -0.33
UBE3B-201ENST00000340074 PLSCR5A0PG75 271 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 SLC22A31A6NKX4 558 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 RNF223E7ERA6 249 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 E9PQ18 207 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 SMAD7O15105 426 aaKnown RBP13.01□□□□□ -0.33
UBE3B-201ENST00000340074 MT-ND5P03915 603 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 LYNP07948 512 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 ANOS1P23352 680 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 MAGEB1P43366 347 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 SLC15A1P46059 708 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 ZNF81P51508 661 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 PRKXP51817 358 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 CDC42P60953 191 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 GRB2P62993 217 aaKnown RBP13.01□□□□□ -0.33
UBE3B-201ENST00000340074 CARTPTQ16568 116 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 SNAI3Q3KNW1 292 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 DRAM2Q6UX65 266 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 FBXW12Q6X9E4 464 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 GID4Q8IVV7 300 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 ZNF454Q8N9F8 522 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 OR8J1Q8NGP2 316 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 C10orf105Q8TEF2 133 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 UBE2FQ969M7 185 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 HAVCR1Q96D42 359 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 C18orf12Q96KH6 178 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 DYSFO75923 2080 aa13.01□□□□□ -0.33
UBE3B-201ENST00000340074 ZSCAN5BA6NJL1 495 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 NCR1O76036 304 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 HPXP02790 462 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 CSF3P09919 207 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 SLC2A1P11166 492 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 RAC2P15153 192 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 ALOX5APP20292 161 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 KITLGP21583 273 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 HSD11B1P28845 292 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 OPRL1P41146 370 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 CX3CR1P49238 355 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 PDLIM4P50479 330 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 GGTLC2Q14390 218 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms