RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 AQP10Q96PS8 301 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF607Q96SK3 696 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SLC25A31Q9H0C2 315 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 EXO5Q9H790 373 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 C20orf141Q9NUB4 165 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 WSB2Q9NYS7 404 aaPredicted RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 CSAG2Q9Y5P2 127 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 CABIN1Q9Y6J0 2220 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ELOA3CA0A087WX78 387 aaPredicted RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 MEIS3P1A6NDR6 274 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 PRSS47A8MTI9 375 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 IFNA17P01571 189 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 APODP05090 189 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 KLK1P06870 262 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF25P17030 456 aaPredicted RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 GGTLC2Q14390 218 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 HNF4GQ14541 408 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 HMGN3Q15651 99 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 FAM166AQ6J272 317 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 STEAP1BQ6NZ63 245 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 RANBP3LQ86VV4 465 aaPredicted RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 STACQ99469 402 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SMAD5Q99717 465 aaKnown RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 C1QTNF2Q9BXJ5 285 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 OR52A5Q9H2C5 316 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 OR52D1Q9H346 318 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 TAS2R8Q9NYW2 309 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 OR14J1Q9UGF5 321 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 GOLT1BQ9Y3E0 138 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 WIF1Q9Y5W5 379 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SMAD9O15198 467 aaKnown RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 RAMP1O60894 148 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ZFPL1O95159 310 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 RPN2P04844 631 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ELFN1P0C7U0 828 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 F3P13726 295 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 NPPBP16860 134 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 S100A2P29034 98 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 PPP1R1AQ13522 171 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 LYPLAL1Q5VWZ2 237 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 PAPD4Q6PIY7 484 aaKnown RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 RD3Q7Z3Z2 195 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 OR5P2Q8WZ92 322 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SEH1LQ96EE3 360 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SYT3Q9BQG1 590 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SLC2A8Q9NY64 477 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 OR5AC2Q9NZP5 309 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 CHRNA9Q9UGM1 479 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 KCNIP3Q9Y2W7 256 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 TRAV8-7A0A075B6U6 113 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SLC22A31A6NKX4 558 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 CPSF4LA6NMK7 179 aaKnown RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 SLC16A8O95907 504 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 PLGP00747 810 aaPredicted RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 SERPINA5P05154 406 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 PSMB6P28072 239 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 CD34P28906 385 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SCAND1P57086 179 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SSBP1Q04837 148 aaKnown RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 EGR3Q06889 387 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 AIMP2Q13155 320 aaKnown RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 MLC1Q15049 377 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 AMZ1Q400G9 498 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SCGB2B2Q4G0G5 96 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SAPCD1Q5SSQ6 148 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF343Q6P1L6 599 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 RPL22L1Q6P5R6 122 aaKnown RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 AGTRAPQ6RW13 159 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 LYG2Q86SG7 212 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 C2orf73Q8N5S3 287 aaPredicted RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 OR5K2Q8NHB8 316 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SLC2A12Q8TD20 617 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 LRFN5Q96NI6 719 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF587Q96SQ5 575 aaPredicted RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 SLC6A7Q99884 636 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SLC25A21Q9BQT8 299 aaPredicted RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 MRI1Q9BV20 369 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 RIOK2Q9BVS4 552 aaKnown RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 TTTY10Q9BZA0 68 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 NMES1Q9C002 83 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 CST11Q9H112 138 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ATG5Q9H1Y0 275 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 KCNK15Q9H427 330 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SYNPO2LQ9H987 977 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 C5AR2Q9P296 337 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 IL36AQ9UHA7 158 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 GAB2Q9UQC2 676 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 TRBV5-5A0A0J9YX44 114 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 A0A1W2PP55 124 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 CLEC18AA5D8T8 446 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 DCTN6O00399 190 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 SLC31A1O15431 190 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 CD37P11049 281 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 RPS2P15880 293 aaKnown RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 FAUP35544 74 aaKnown RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF136P52737 540 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 BTG2P78543 158 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 FOXF1Q12946 379 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 UBE2V2Q15819 145 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TMEM52BQ4KMG9 183 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms