RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 F12P00748 615 aaPredicted RBP16.8■□□□□ 0.28
PSPC1-201ENST00000338910 AMY2AP04746 511 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 ZNF735P0CB33 412 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 PNMTP11086 282 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 AQP2P41181 271 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 GRK6P43250 576 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 NPBWR1P48145 328 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 CAPZA1P52907 286 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 RPS4XP62701 263 aaKnown RBP16.8■□□□□ 0.28
PSPC1-201ENST00000338910 ZNF676Q8N7Q3 588 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 EXD3Q8N9H8 876 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 OR6C1Q96RD1 312 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 MNTQ99583 582 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 PTDSS2Q9BVG9 487 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 ADAMTS20P59510 1910 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 LOC100289279A0A1B0GTE1 492 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 TMEM212A6NML5 194 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 LINC00587B1AMM8 73 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 SULT1C2O00338 296 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 FADS1O60427 444 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 EIF3GO75821 320 aaKnown RBP eCLIP16.8■□□□□ 0.28
PSPC1-201ENST00000338910 SNAPINO95295 136 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 TIAF1O95411 115 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 GLAP06280 429 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 HEXAP06865 529 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 ACAA1P09110 424 aaPredicted RBP16.8■□□□□ 0.28
PSPC1-201ENST00000338910 HLA-GP17693 338 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 TACR3P29371 465 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 PNLIPRP2P54317 469 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 DCAF7P61962 342 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 ZNF117Q03924 483 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 EGR4Q05215 589 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 PLCXD2Q0VAA5 305 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 SLC29A4Q7RTT9 530 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 FAM122BQ7Z309 247 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 STT3BQ8TCJ2 826 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 GPX7Q96SL4 187 aaPredicted RBP16.8■□□□□ 0.28
PSPC1-201ENST00000338910 COMMD4Q9H0A8 199 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 TMEM100Q9NV29 134 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 MYEF2Q9P2K5 600 aaKnown RBP16.8■□□□□ 0.28
PSPC1-201ENST00000338910 LHX6Q9UPM6 363 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 MPDZO75970 2070 aa16.8■□□□□ 0.28
PSPC1-201ENST00000338910 OR2AT4A6NND4 320 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 RAD1O60671 282 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 ALOX12BO75342 701 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 HLA-AP01891 365 aaKnown RBP16.79■□□□□ 0.28
PSPC1-201ENST00000338910 CD79AP11912 226 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 SLC25A1P53007 311 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 TOMM34Q15785 309 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-201ENST00000338910 SWI5Q1ZZU3 235 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 COX15Q7KZN9 410 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 CDC20BQ86Y33 519 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 GTPBP8Q8N3Z3 284 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-201ENST00000338910 OR5AP2Q8NGF4 316 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 RXFP4Q8TDU9 374 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 ZBTB8AQ96BR9 441 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 ULBP3Q9BZM4 244 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 ATG5Q9H1Y0 275 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 TMEM200CA6NKL6 621 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 SLC17A2O00624 439 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 TOX3O15405 576 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-201ENST00000338910 NUDT14O95848 222 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 ABCD3P28288 659 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 TOMM20Q15388 145 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 RAB11BQ15907 218 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 ZNF74Q16587 644 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 PLEKHN1Q494U1 663 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-201ENST00000338910 UNQ6126/PRO20091Q6UXV3 157 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 C16orf47Q6ZP98 133 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-201ENST00000338910 PRSS35Q8N3Z0 413 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 OR13C8Q8NGS7 320 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 STOML3Q8TAV4 291 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 ARL11Q969Q4 196 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 KTI12Q96EK9 354 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-201ENST00000338910 IKZF2Q9UKS7 526 aa16.79■□□□□ 0.28
PSPC1-201ENST00000338910 NOSIPQ9Y314 301 aaKnown RBP16.79■□□□□ 0.28
PSPC1-201ENST00000338910 TSPAN2O60636 221 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 FBXO45P0C2W1 286 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 PRPS1P60891 318 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 ODF4Q2M2E3 257 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 IGSF11Q5DX21 431 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 FAM166AQ6J272 317 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 RHBDD2Q6NTF9 364 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 OR4A4PQ8NGN8 299 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 TBL1XR1Q9BZK7 514 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 LAT2Q9GZY6 243 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 IGHV5-10-1A0A0J9YXX1 117 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 F13BP05160 661 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 PDZK1IP1Q13113 114 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 SQSTM1Q13501 440 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 NDUFAF7Q7L592 441 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 ZFP82Q8N141 532 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 PAQR8Q8TEZ7 354 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 RELTQ969Z4 430 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 PIK3IP1Q96FE7 263 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 SEC11CQ9BY50 192 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 MMP25Q9NPA2 562 aa16.78■□□□□ 0.28
PSPC1-201ENST00000338910 F8VVB4 439 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 F8VWA3 439 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 DCTN6O00399 190 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms