RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ZNF385CQ66K41 422 aaPredicted RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 FCRL6Q6DN72 434 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 RPUSD3Q6P087 351 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 ZNF793Q6ZN11 406 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 PRSS35Q8N3Z0 413 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 RAB42Q8N4Z0 105 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 AVL9Q8NBF6 648 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 STT3BQ8TCJ2 826 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 RHBDD1Q8TEB9 315 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ASB5Q8WWX0 329 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 GAL3ST3Q96A11 431 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 DTD2Q96FN9 168 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ADAD1Q96M93 576 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 GNRHR2Q96P88 292 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 DDA1Q9BW61 102 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ZDHHC6Q9H6R6 413 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 OR2S2Q9NQN1 319 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 PRDM7Q9NQW5 492 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 FBLN5Q9UBX5 448 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 LSM7Q9UK45 103 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 DKKL1Q9UK85 242 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 OR52A1Q9UKL2 312 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 FARSAQ9Y285 508 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 GRM6O15303 877 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 DLEU1O43261 78 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 LDB3O75112 727 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 IFNA6P05013 189 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 DAOP14920 347 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 EPHA1P21709 976 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 SOX2P48431 317 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 CCR4P51679 360 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 SLC35A1P78382 337 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 H3F3AP84243 136 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 COTL1Q14019 142 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 TGIF1Q15583 401 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 GGNBP1Q5YKI7 109 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 SLC8B1Q6J4K2 584 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 ZNF627Q7L945 461 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 SLC35E3Q7Z769 313 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 TAF8Q7Z7C8 310 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 TMEM183AQ8IXX5 376 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 OR10G4Q8NGN3 311 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 LIPHQ8WWY8 451 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 WBP2Q969T9 261 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 ADGRG7Q96K78 797 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 C4orf45Q96LM5 186 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 SLC25A31Q9H0C2 315 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 MKKSQ9NPJ1 570 aaPredicted RBP7.53□□□□□ -1.2
SKA2-201ENST00000330137 OR5AC2Q9NZP5 309 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 TAC3Q9UHF0 121 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 GPR132Q9UNW8 380 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 GOLT1BQ9Y3E0 138 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 SCN10AQ9Y5Y9 1956 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
SKA2-201ENST00000330137 KIAA1549LQ6ZVL6 1849 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 ZNF264O43296 627 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 DFFBO76075 338 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 TXNDC12O95881 172 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 ZNF28P17035 718 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 GLIPR1P48060 266 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 DHPSP49366 369 aaPredicted RBP7.53□□□□□ -1.2
SKA2-201ENST00000330137 RPS4XP62701 263 aaKnown RBP7.53□□□□□ -1.2
SKA2-201ENST00000330137 CSNK1G2P78368 415 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 FAM189A2Q15884 450 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 SAPCD1Q5SSQ6 148 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 GDF6Q6KF10 455 aaPredicted RBP7.53□□□□□ -1.2
SKA2-201ENST00000330137 ABHD17CQ6PCB6 329 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 SLC24A5Q71RS6 500 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 C7orf61Q8IZ16 206 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 LMNTD1Q8N9Z9 388 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 SUMF2Q8NBJ7 301 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 SLC16A11Q8NCK7 471 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 OR5K2Q8NHB8 316 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 OR10J5Q8NHC4 309 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 ZNF563Q8TA94 476 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 MVB12AQ96EY5 273 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 TGM7Q96PF1 710 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 NUDT9Q9BW91 350 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 TTTY10Q9BZA0 68 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 WDR76Q9H967 626 aa7.53□□□□□ -1.2
SKA2-201ENST00000330137 A0A087WV62 115 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 K7EPK0 472 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 ZNF217O75362 1048 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 FPR2P25090 351 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 RPL12P30050 165 aaKnown RBP7.52□□□□□ -1.21
SKA2-201ENST00000330137 ECI1P42126 302 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 RND2P52198 227 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 BEX3Q00994 111 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 CLLU1OSQ5K130 101 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 ULK3Q6PHR2 472 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 NUP54Q7Z3B4 507 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 C11orf96Q7Z7L8 435 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 LRRC25Q8N386 305 aaPredicted RBP7.52□□□□□ -1.21
SKA2-201ENST00000330137 FAM71E2Q8N5Q1 922 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 ZNF283Q8N7M2 679 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 OR9A2Q8NGT5 310 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 OR6K6Q8NGW6 343 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 CD300LFQ8TDQ1 290 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 CASTOR1Q8WTX7 329 aa7.52□□□□□ -1.21
SKA2-201ENST00000330137 SUSD6Q92537 303 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms