RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 H1FNTQ75WM6 255 aaPredicted RBP13.71□□□□□ -0.21
BRCC3-201ENST00000330045 FJX1Q86VR8 437 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 WDFY1Q8IWB7 410 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 SPEM1Q8N4L4 309 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 OR6S1Q8NH40 331 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 FGGYQ96C11 551 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 KCNK17Q96T54 332 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 PRRT1Q99946 306 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 MS4A7Q9GZW8 240 aaPredicted RBP13.71□□□□□ -0.21
BRCC3-201ENST00000330045 COMMD9Q9P000 198 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 VSIG4Q9Y279 399 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 C2orf72A6NCS6 295 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 OR14I1A6ND48 311 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 RAB27BO00194 218 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 EIF1AYO14602 144 aaKnown RBP13.7□□□□□ -0.22
BRCC3-201ENST00000330045 BDKRB2P30411 391 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 HNRNPKP61978 463 aaKnown RBP eCLIP13.7□□□□□ -0.22
BRCC3-201ENST00000330045 C3orf33Q6P1S2 294 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 ZNF813Q6ZN06 617 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 MISPQ8IVT2 679 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 PXT1Q8NFP0 134 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 MED29Q9NX70 200 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 SLC2A8Q9NY64 477 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 CEP192Q8TEP8 1941 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 CPED1A4D0V7 1026 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 WIPF3A6NGB9 483 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 LIPCP11150 499 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 MMP16P51512 607 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 POU3F1Q03052 451 aaPredicted RBP13.7□□□□□ -0.22
BRCC3-201ENST00000330045 TAF13Q15543 124 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 C11orf87Q6NUJ2 197 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 C16orf47Q6ZP98 133 aaPredicted RBP13.7□□□□□ -0.22
BRCC3-201ENST00000330045 TRAPPC6BQ86SZ2 158 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 SLC25A42Q86VD7 318 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 D2HGDHQ8N465 521 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 KCNRGQ8N5I3 272 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 MFSD8Q8NHS3 518 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 RNF133Q8WVZ7 376 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 SHDQ96IW2 340 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 ZDBF2Q9HCK1 2354 aa13.7□□□□□ -0.22
BRCC3-201ENST00000330045 IGHV1OR21-1A0A087WYE8 117 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 A0A1B0GW55 424 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 A0A1B0GX78 115 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 KANTRA0A1W2PQU2 76 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 CCSO14618 274 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 DUX4L2P0CJ85 424 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 DUX4L3P0CJ86 424 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 DUX4L4P0CJ87 422 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 DUX4L5P0CJ88 424 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 DUX4L6P0CJ89 424 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 DUX4L7P0CJ90 424 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 SLC25A4P12235 298 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 GNALP38405 381 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 RNF4P78317 190 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 CFHR1Q03591 330 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 LRRC37A5PQ49AS3 106 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 JMJD6Q6NYC1 403 aaPredicted RBP13.69□□□□□ -0.22
BRCC3-201ENST00000330045 ARSKQ6UWY0 536 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 SHISA6Q6ZSJ9 500 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 PLXDC1Q8IUK5 500 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 PAQR4Q8N4S7 273 aaPredicted RBP13.69□□□□□ -0.22
BRCC3-201ENST00000330045 GVQW1Q8N7I0 195 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 CHST4Q8NCG5 386 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 ST8SIA1Q92185 356 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 FAM46BQ96A09 425 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 CMBLQ96DG6 245 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 SEC22AQ96IW7 307 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 TMEM185BQ9H7F4 350 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 C12orf4Q9NQ89 552 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 DUX4Q9UBX2 424 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 SUSD2Q9UGT4 822 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 TNFSF18Q9UNG2 199 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 LOC100509620A0A075B734 347 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 ANKUB1A6NFN9 424 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 TRIM77I1YAP6 450 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 OR2F2O95006 317 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 ZBTB25P24278 435 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 HSD11B1P28845 292 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 HSF1Q00613 529 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 TLE3Q04726 772 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 OR2F1Q13607 317 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 ZNF345Q14585 488 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 TFAP2EQ6VUC0 442 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 LYG2Q86SG7 212 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 OR52N4Q8NGI2 321 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 OR10K1Q8NGX5 313 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 CLDN23Q96B33 292 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 FAM206AQ9NX38 181 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 RASL12Q9NYN1 266 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 CTSFQ9UBX1 484 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 SIT1Q9Y3P8 196 aa13.69□□□□□ -0.22
BRCC3-201ENST00000330045 FER1L5A0AVI2 2057 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 IGHV3-20A0A0C4DH32 117 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 APOBEC1P41238 236 aaKnown RBP13.68□□□□□ -0.22
BRCC3-201ENST00000330045 C17orf67Q0P5P2 114 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 UNC119Q13432 240 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 CARFQ8N187 725 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 PLPP5Q8NEB5 264 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 PPP1R1CQ8WVI7 109 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 MRPS24Q96EL2 167 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms