RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TCFL5Q9UL49 500 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 MTCL1Q9Y4B5 1905 aaKnown RBP10.67□□□□□ -0.7
SHMT2-201ENST00000328923 C5orf51A6NDU8 294 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 TVP23AA6NH52 213 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 M0QZ24 198 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 AQP7O14520 342 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 PIN1P1O15428 100 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 OPN1LWP04000 364 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 ALPPL2P10696 532 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 SRMP19623 302 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 SLC16A1P53985 500 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 MANFP55145 182 aaKnown RBP10.66□□□□□ -0.7
SHMT2-201ENST00000328923 DCAF7P61962 342 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 PGGHGQ32M88 737 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 GXYLT1Q4G148 440 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 OLIG3Q7RTU3 272 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 DCXRQ7Z4W1 244 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 RFLNBQ8N5W9 214 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 TMEM104Q8NE00 496 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 OR2J1Q9GZK6 312 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 CSTL1Q9H114 145 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 MSL2Q9HCI7 577 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 SIRT3Q9NTG7 399 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-201ENST00000328923 HAO2Q9NYQ3 351 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 UPB1Q9UBR1 384 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 POLR3KQ9Y2Y1 108 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-201ENST00000328923 DYRK1BQ9Y463 629 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 XIRP2A4UGR9 3374 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 H7BY64 318 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 OR2J2O76002 312 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 CHRNB4P30926 498 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 TAGLN2P37802 199 aaKnown RBP10.66□□□□□ -0.7
SHMT2-201ENST00000328923 UCP3P55916 312 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF85Q03923 595 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 HAGHQ16775 308 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 ATP6V1FQ16864 119 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 SLC39A11Q8N1S5 342 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 METTL27Q8N6F8 245 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-201ENST00000328923 ACOT4Q8N9L9 421 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 MIB2Q96AX9 1013 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 PDCD1LG2Q9BQ51 273 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 KLF16Q9BXK1 252 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-201ENST00000328923 SLC35B3Q9H1N7 401 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 Q9N2J8 555 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 MRPS33Q9Y291 106 aaKnown RBP10.66□□□□□ -0.7
SHMT2-201ENST00000328923 YIPF1Q9Y548 306 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 DNAH14Q0VDD8 3507 aa10.66□□□□□ -0.7
SHMT2-201ENST00000328923 IFNL4K9M1U5 179 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 GRM6O15303 877 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 DOK2O60496 412 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 B4GALT2O60909 372 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 TMEM127O75204 238 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 PTNP21246 168 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 MDKP21741 143 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-201ENST00000328923 WNT5AP41221 380 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 KLF3P57682 345 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-201ENST00000328923 UBE2KP61086 200 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 RAP1BP61224 184 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 TBPL1P62380 186 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 DEFB103AP81534 67 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 TP53I3Q53FA7 332 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 NUFIP2Q7Z417 695 aaKnown RBP10.65□□□□□ -0.7
SHMT2-201ENST00000328923 CACUL1Q86Y37 369 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF100Q8IYN0 542 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 C7orf61Q8IZ16 206 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 GABRG1Q8N1C3 465 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 OR56B2PQ8NGI1 322 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 LYPD6BQ8NI32 183 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 CASTOR1Q8WTX7 329 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 TNFRSF14Q92956 283 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 TIFAQ96CG3 184 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 SGPP1Q9BX95 441 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 GPR174Q9BXC1 333 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 TAS2R8Q9NYW2 309 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 AHSPQ9NZD4 102 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 CUL9Q8IWT3 2517 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 PLXNA2O75051 1894 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 TRBV6-7A0A0A0MS04 114 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 CXorf51AA0A1B0GTR3 108 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 SAP18O00422 153 aaKnown RBP10.65□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF264O43296 627 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 EPPINO95925 133 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 LCATP04180 440 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 HLA-GP17693 338 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 GPR4P46093 362 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 TAS2R38P59533 333 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 PPP1R1AQ13522 171 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 MLC1Q15049 377 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 CCSMST1Q4G0I0 132 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 MEPCEQ7L2J0 689 aaKnown RBP10.65□□□□□ -0.7
SHMT2-201ENST00000328923 OR2AP1Q8NGE2 309 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 SUN3Q8TAQ9 357 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 KISS1RQ969F8 398 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-201ENST00000328923 RAB39BQ96DA2 213 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 TP53RKQ96S44 253 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 SF3B5Q9BWJ5 86 aaKnown RBP10.65□□□□□ -0.7
SHMT2-201ENST00000328923 TRIM2Q9C040 744 aa10.65□□□□□ -0.7
SHMT2-201ENST00000328923 LOC105371242A0A075B767 164 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 PRAMEF27A3QJZ7 478 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 ZNF354AO60765 605 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms