RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	SKP2	Q13309	424 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	MRPL49	Q13405	166 aa	Known RBP	10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	BTN1A1	Q13410	526 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	IRF3	Q14653	427 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	GSG1L	Q6UXU4	331 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	SLC22A24	Q8N4F4	322 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	CMSS1	Q9BQ75	279 aa	Known RBP	10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	MRM2	Q9UI43	246 aa	Known RBP	10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	WNK2	Q9Y3S1	2297 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	SLC22A23	A1A5C7	686 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	PLPP2	O43688	288 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	ADAM11	O75078	769 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	SMIM10L1	P0DMW3	83 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	HOXB9	P17482	250 aa	Predicted RBP	10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	LIMS1	P48059	325 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	P2RX3	P56373	397 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	FOXK1	P85037	733 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	OR2AE1	Q8NHA4	323 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	SMIM10	Q96HG1	83 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	MRGPRX4	Q96LA9	322 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	ISYNA1	Q9NPH2	558 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	NAP1L6	A6NFF2	107 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	OR6C76	A6NM76	312 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771		M0R135	149 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	UBC	P0CG48	685 aa	Known RBP	10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	GAA	P10253	952 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	GNB3	P16520	340 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	BAMBI	Q13145	260 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	LINC00299	Q6ZSB3	139 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	TMPRSS7	Q7RTY8	843 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	STEAP2	Q8NFT2	490 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	HAVCR2	Q8TDQ0	301 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	DCUN1D4	Q92564	292 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	TTC9	Q92623	222 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	ZNF799	Q96GE5	643 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	OR2M2	Q96R28	347 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	PBOV1	Q9GZY1	135 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	LANCL2	Q9NS86	450 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	DUSP13	Q9UII6	198 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	FER1L5	A0AVI2	2057 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	MUC6	Q6W4X9	2439 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771		A0A0A6YYJ9	748 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771		A0A1W2PQM1	296 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	YKT6	O15498	198 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	MSR1	P21757	451 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	DUSP1	P28562	367 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	ETV6	P41212	452 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	ECH1	Q13011	328 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	RBMS2	Q15434	407 aa	Known RBP	10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	BCL2A1	Q16548	175 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	CEACAM16	Q2WEN9	425 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	EMC4	Q5J8M3	183 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	CCDC54	Q8NEL0	328 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	SLC25A43	Q8WUT9	341 aa	Predicted RBP	10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	LIPH	Q8WWY8	451 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	PHB2	Q99623	299 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	PSD2	Q9BQI7	771 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	KCNN3	Q9UGI6	736 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	ANKUB1	A6NFN9	424 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	CCL3	P10147	92 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	LSMEM1	Q8N8F7	131 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	ZNF721	Q8TF20	911 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	UCN2	Q96RP3	112 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	SARG	Q9BW04	601 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	CRLF2	Q9HC73	371 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	CYSLTR2	Q9NS75	346 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	SCN8A	Q9UQD0	1980 aa		10.61	□□□□□ -0.71
DDR1-223	ENST00000324771	DHH	O43323	396 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	TPO	P07202	933 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	CCL2	P13500	99 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	ALOX5AP	P20292	161 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	MRPS10	P82664	201 aa	Known RBP	10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	OR52W1	Q6IF63	320 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	BRICD5	Q6PL45	260 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	ADGRE4P	Q86SQ3	457 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	ZNF546	Q86UE3	836 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	GCNT2	Q8N0V5	402 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	OR51A2	Q8NGJ7	313 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	C4orf45	Q96LM5	186 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	HRASLS	Q9HDD0	168 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	PCDHB16	Q9NRJ7	776 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	EXOG	Q9Y2C4	368 aa	Known RBP	10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	KLHDC2	Q9Y2U9	406 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	PHF3	Q92576	2039 aa	Known RBP	10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	SPG11	Q96JI7	2443 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771		A0A1W2PR77	199 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	TMEM229A	B2RXF0	380 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771		D6RAR5	112 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771		H7C417	338 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	GPR171	O14626	319 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	CAV2	P51636	162 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	C3AR1	Q16581	482 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	SLC38A9	Q8NBW4	561 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	OR1M1	Q8NGA1	313 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	OXGR1	Q96P68	337 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	MNT	Q99583	582 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	MRI1	Q9BV20	369 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	PCED1A	Q9H1Q7	454 aa		10.6	□□□□□ -0.71
DDR1-223	ENST00000324771	OBP2B	Q9NPH6	170 aa		10.6	□□□□□ -0.71

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