RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 GPR75O95800 540 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 S100A7P31151 101 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 MNX1P50219 401 aaPredicted RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 ANKRD16Q6P6B7 361 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 ZNF66Q6ZN08 573 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 CMTM4Q8IZR5 234 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 PGAP3Q96FM1 320 aaPredicted RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 TRMT61AQ96FX7 289 aaKnown RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 CHST8Q9H2A9 424 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 TRAPPC1Q9Y5R8 145 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 PRKNO60260 465 aaPredicted RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 C19orf47Q8N9M1 422 aaKnown RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 DTWD2Q8NBA8 298 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 YIPF6Q96EC8 236 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SEMA6CQ9H3T2 930 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SONP18583 2426 aaKnown RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 S100A8P05109 93 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 REEP5Q00765 189 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 IQCJQ1A5X6 159 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 ZNF626Q68DY1 528 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 DCXRQ7Z4W1 244 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 KDF1Q8NAX2 398 aaPredicted RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 SHARPINQ9H0F6 387 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 DHCR7Q9UBM7 475 aaKnown RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 ARNTLO00327 626 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 FGF4P08620 206 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 GABREP78334 506 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 HNRNPA1L2Q32P51 320 aaKnown RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 PRSS36Q5K4E3 855 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 THEM4Q5T1C6 240 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 HENMT1Q5T8I9 393 aaKnown RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 SAXO2Q658L1 398 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 CLDN22Q8N7P3 220 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 NUDCD2Q8WVJ2 157 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 RCL1Q9Y2P8 373 aaKnown RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 CNMDO75829 334 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SFTA3P0C7M3 94 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 PPP1CBP62140 327 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 OR8G1Q15617 311 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 ACOT6Q3I5F7 207 aaPredicted RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 FAM26EQ8N5C1 309 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 HLA-CQ95604 372 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SMIM12Q96EX1 92 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 MEGF10Q96KG7 1140 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 BMPR1BO00238 502 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 Q3ZCU0 254 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 ADGRG3Q86Y34 549 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 ATOH8Q96SQ7 321 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SLC46A2Q9BY10 475 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 NECAP2Q9NVZ3 263 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SLC22A7Q9Y694 548 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 GFRA2O00451 464 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 NRG2O14511 850 aaPredicted RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 ETV6P41212 452 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 SUOXP51687 545 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 CD300CQ08708 224 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 PRTGQ2VWP7 1150 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 LHX6Q9UPM6 363 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 OR5K3A6NET4 321 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 OPN1MWP04001 364 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 ZNF865P0CJ78 1059 aaPredicted RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 OPN1MW2P0DN77 364 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 OPN1MW3P0DN78 364 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 SULT1A2P50226 295 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 ANGPTL6Q8NI99 470 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 RTP4Q96DX8 246 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 AUNIPQ9H7T9 357 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 IL17CQ9P0M4 197 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 DNMT3BQ9UBC3 853 aaKnown RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 SPINT2O43291 252 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 OR2F2O95006 317 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 OR2F1Q13607 317 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 NCR3LG1Q68D85 454 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 DEFB108BQ8NET1 73 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 TSLPQ969D9 159 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 ZNF583Q96ND8 569 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 ESRP2Q9H6T0 727 aaKnown RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 IL17BQ9UHF5 180 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 A0A087X0M5 115 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 A0A1B0GX30 115 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 SERINC4A6NH21 518 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 ZP3P21754 424 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 MAP2K6P52564 334 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 HSD17B7P56937 341 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 CDC20Q12834 499 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 MFAP5Q13361 173 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 OR10J5Q8NHC4 309 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 FBXO17Q96EF6 278 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 FOXQ1Q9C009 403 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 WDR76Q9H967 626 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 RHOFQ9HBH0 211 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 NGBQ9NPG2 151 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 KMT2EQ8IZD2 1858 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 ONECUT2O95948 504 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 CPEP16870 476 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 IL3RAP26951 378 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 NKX2-1P43699 371 aaPredicted RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 UBE2G1P62253 170 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms