RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 MYLKQ15746 1914 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 SNRPGP15A8MWD9 76 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 HSPB6O14558 160 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 EEF1A1P68104 462 aaKnown RBP13.79□□□□□ -0.2
VARS2-201ENST00000321897 FZD2Q14332 565 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 ADGRL4Q9HBW9 690 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 A0A0G2JMZ2 1700 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 LRRC37A2A6NM11 1700 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 SIP14410 1827 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 IGHV3-15A0A0B4J1V0 119 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 A0A0B4J2E0 115 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 A0A1B0GX12 115 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 A0A1W2PPC4 97 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 SLC34A2O95436 690 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 BAP18Q8IXM2 172 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 OR51T1Q8NGJ9 327 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 ZNF160Q9HCG1 818 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 OR5V1Q9UGF6 321 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 ZSWIM8A7E2V4 1837 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 CRABP1P29762 137 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 PLGLB1Q02325 96 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 SUMF2Q8NBJ7 301 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 SHDQ96IW2 340 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 AICDAQ9GZX7 198 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 DNAJB12Q9NXW2 375 aaKnown RBP13.78□□□□□ -0.2
VARS2-201ENST00000321897 MMP24Q9Y5R2 645 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 ZGLP1P0C6A0 271 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 RFC3P40938 356 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 ZNF136P52737 540 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 NCMAPQ5T1S8 102 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 OR52W1Q6IF63 320 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 PRR18Q8N4B5 295 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 OR14A16Q8NHC5 309 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 NUDT9Q9BW91 350 aa13.78□□□□□ -0.2
VARS2-201ENST00000321897 MRPL22Q9NWU5 206 aaKnown RBP13.78□□□□□ -0.2
VARS2-201ENST00000321897 TUBAL3A6NHL2 446 aa13.77□□□□□ -0.2
VARS2-201ENST00000321897 K7EPK0 472 aa13.77□□□□□ -0.2
VARS2-201ENST00000321897 ZNF354AO60765 605 aaPredicted RBP13.77□□□□□ -0.2
VARS2-201ENST00000321897 IDH3GP51553 393 aaPredicted RBP13.77□□□□□ -0.2
VARS2-201ENST00000321897 HSD17B7P56937 341 aa13.77□□□□□ -0.2
VARS2-201ENST00000321897 C2orf76Q3KRA6 126 aa13.77□□□□□ -0.2
VARS2-201ENST00000321897 HSD17B13Q7Z5P4 300 aaPredicted RBP13.77□□□□□ -0.2
VARS2-201ENST00000321897 FAM71E2Q8N5Q1 922 aa13.77□□□□□ -0.2
VARS2-201ENST00000321897 OR4D6Q8NGJ1 314 aa13.77□□□□□ -0.2
VARS2-201ENST00000321897 SLC46A1Q96NT5 459 aa13.77□□□□□ -0.2
VARS2-201ENST00000321897 PBDC1Q9BVG4 233 aa13.77□□□□□ -0.2
VARS2-201ENST00000321897 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 TSTD3H0UI37 97 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 SDCBPO00560 298 aaPredicted RBP13.77□□□□□ -0.21
VARS2-201ENST00000321897 CDAP32320 146 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 CAPZBP47756 277 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 AFF3P51826 1226 aaKnown RBP13.77□□□□□ -0.21
VARS2-201ENST00000321897 KIF26BQ2KJY2 2108 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 ACTBL2Q562R1 376 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 OR51A4Q8NGJ6 313 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 OR4K15Q8NH41 348 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 GIMAP5Q96F15 307 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 KCNE5Q9UJ90 142 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 CES1P1Q9UKY3 287 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 TP53I11O14683 189 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 PLPP2O43688 288 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 OR2F2O95006 317 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 SLC6A8P48029 635 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 CLDN17P56750 224 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 OR2F1Q13607 317 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 DOC2BQ14184 412 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 C21orf62-AS1Q17RA5 79 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 ZNF626Q68DY1 528 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 Q6ZRG5 221 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 FAM71CQ8NEG0 241 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 OR11G2Q8NGC1 345 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 PIGTQ969N2 578 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 PRR13Q9NZ81 148 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 C19orf25Q9UFG5 118 aaPredicted RBP13.77□□□□□ -0.21
VARS2-201ENST00000321897 KCNIP3Q9Y2W7 256 aa13.77□□□□□ -0.21
VARS2-201ENST00000321897 SF3B6Q9Y3B4 125 aaKnown RBP13.77□□□□□ -0.21
VARS2-201ENST00000321897 SULT1B1O43704 296 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 MLC1Q15049 377 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 HIST2H3AQ71DI3 136 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 FNDC9Q8TBE3 224 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 DDIT4LQ96D03 193 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 CMBLQ96DG6 245 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 MRI1Q9BV20 369 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 CNTNAP3Q9BZ76 1288 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 PRO1933Q9H354 126 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 EHFQ9NZC4 300 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 ESPL1Q14674 2120 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 NSA2O95478 260 aaKnown RBP13.76□□□□□ -0.21
VARS2-201ENST00000321897 MECP2P51608 486 aaKnown RBP13.76□□□□□ -0.21
VARS2-201ENST00000321897 SLC26A5P58743 744 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 SOHLH1Q5JUK2 328 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 OR5L2Q8NGL0 311 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 OR2G2Q8NGZ5 317 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 CA5BP1Q8WTZ4 195 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 TAAR8Q969N4 342 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 RHOFQ9HBH0 211 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 RALGAPA2Q2PPJ7 1873 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 PCNX1Q96RV3 2341 aa13.76□□□□□ -0.21
VARS2-201ENST00000321897 SCN4AP35499 1836 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms