RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SP6Q3SY56 376 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 TMEM52BQ4KMG9 183 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 OR52N4Q8NGI2 321 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 AKR7LQ8NHP1 331 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 ZNF775Q96BV0 537 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-201ENST00000318607 PLEKHA1Q9HB21 404 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 HAO2Q9NYQ3 351 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 RHBDD3Q9Y3P4 386 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 A0A087WUJ7 227 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 LOC107986453A0A1B0GWG9 222 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 ERGP11308 486 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 CTSEP14091 401 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 BTF3P20290 206 aaKnown RBP12.76□□□□□ -0.37
PABPC1-201ENST00000318607 OMGP23515 440 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 NR0B1P51843 470 aaKnown RBP12.76□□□□□ -0.37
PABPC1-201ENST00000318607 PRPS1P60891 318 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 RAB32Q13637 225 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 FAM109BQ6ICB4 259 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-201ENST00000318607 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 ZNF679Q8IYX0 411 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 OR4K15Q8NH41 348 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 SOX7Q9BT81 388 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 TPRP12270 2363 aaKnown RBP12.76□□□□□ -0.37
PABPC1-201ENST00000318607 CEP250Q9BV73 2442 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 C9orf170A2RU37 121 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 FAM221AA4D161 298 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 TMEM212A6NML5 194 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 NDUFA2O43678 99 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 TIMP1P01033 207 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 GAAP10253 952 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 CCL5P13501 91 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 SPINK2P20155 84 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 GLRA1P23415 457 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-201ENST00000318607 UNQ9370/PRO34162Q6UXP9 181 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 MOB3CQ70IA8 216 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 OR4A4PQ8NGN8 299 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 GLYATL2Q8WU03 294 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 PFDN5Q99471 154 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 RGCCQ9H4X1 137 aa12.76□□□□□ -0.37
PABPC1-201ENST00000318607 MTCL1Q9Y4B5 1905 aaKnown RBP12.76□□□□□ -0.37
PABPC1-201ENST00000318607 TUBAL3A6NHL2 446 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 C17orf105B2RV13 164 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 SULT2B1O00204 365 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 CXCL10P02778 98 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 RFC3P40938 356 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 HOXA1P49639 335 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-201ENST00000318607 FXYD4P59646 89 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 RPS21P63220 83 aaKnown RBP12.75□□□□□ -0.37
PABPC1-201ENST00000318607 IL10RAQ13651 578 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 C1orf189Q5VU69 101 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 CYB5R2Q6BCY4 276 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 ANGPTL5Q86XS5 388 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 RNF141Q8WVD5 230 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 REEP6Q96HR9 211 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 LCORQ96JN0 433 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-201ENST00000318607 ABHD6Q9BV23 337 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 TBL1XR1Q9BZK7 514 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 TGIF2Q9GZN2 237 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 NXF5Q9H1B4 397 aaKnown RBP12.75□□□□□ -0.37
PABPC1-201ENST00000318607 OR10A5Q9H207 317 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 B3GALT1Q9Y5Z6 326 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 SHANK1Q9Y566 2161 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 IGHV3-20A0A0C4DH32 117 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 H7C1Q1 480 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 YIF1AO95070 293 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 DIRAS3O95661 229 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 ABOP16442 354 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 IL11P20809 199 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 RPS10P46783 165 aaKnown RBP12.75□□□□□ -0.37
PABPC1-201ENST00000318607 EMP2P54851 167 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 C4orf17Q53FE4 359 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 S100PBPQ96BU1 408 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 SERTAD3Q9UJW9 196 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 ETV7Q9Y603 341 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 TEX13DA0A0J9YY54 714 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-201ENST00000318607 SLC17A2O00624 439 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 CRTAPO75718 401 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-201ENST00000318607 OR2F2O95006 317 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 OR2F1Q13607 317 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 OR2A2Q6IF42 318 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 SLC18B1Q6NT16 456 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 Q6ZRG5 221 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 ZSCAN4Q8NAM6 433 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-201ENST00000318607 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-201ENST00000318607 RHOVQ96L33 236 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 MAP3K3Q99759 626 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 TEX101Q9BY14 249 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 RTN4RQ9BZR6 473 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 CNTD2Q9H8S5 307 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 SPACA1Q9HBV2 294 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 RNF215Q9Y6U7 377 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 ZNF407Q9C0G0 2248 aa12.75□□□□□ -0.37
PABPC1-201ENST00000318607 MEX3AA1L020 520 aaKnown RBP12.74□□□□□ -0.37
PABPC1-201ENST00000318607 C9JQL5 133 aa12.74□□□□□ -0.37
PABPC1-201ENST00000318607 TGFBR3LH3BV60 316 aa12.74□□□□□ -0.37
PABPC1-201ENST00000318607 LILRB3O75022 631 aa12.74□□□□□ -0.37
PABPC1-201ENST00000318607 GNRH1P01148 92 aa12.74□□□□□ -0.37
PABPC1-201ENST00000318607 PDCD1Q15116 288 aa12.74□□□□□ -0.37
PABPC1-201ENST00000318607 ZNF74Q16587 644 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms