RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ATF1P18846 271 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 HTR2AP28223 471 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 PYCR1P32322 319 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 FAUP35544 74 aaKnown RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 OR1D4P47884 311 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 GDI2P50395 445 aaKnown RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 GPR143P51810 404 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 OR12D2P58182 307 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 RAB8AP61006 207 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 RPS11P62280 158 aaKnown RBP eCLIP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 POU6F2P78424 691 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 PMP22Q01453 160 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 SSBP1Q04837 148 aaKnown RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 SLC3A1Q07837 685 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 EXOSC2Q13868 293 aaKnown RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 CRMP1Q14194 572 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 INSL4Q14641 139 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 MFSD13AQ14CX5 517 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 PON3Q15166 354 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 TOMM20Q15388 145 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 LTB4RQ15722 352 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 MPPED2Q15777 294 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF141Q15928 474 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 AANATQ16613 207 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF750Q32MQ0 723 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 SLC25A35Q3KQZ1 300 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 LGALSLQ3ZCW2 172 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 FAAH2Q6GMR7 532 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 RPUSD3Q6P087 351 aaKnown RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 LRRN1Q6UXK5 716 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 GLDNQ6ZMI3 551 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 WDR88Q6ZMY6 472 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 DPY19L2P2Q6ZN68 376 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ABHD13Q7L211 337 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 LINGO2Q7L985 606 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF550Q7Z398 422 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 NUP54Q7Z3B4 507 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 GPAT4Q86UL3 456 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 SLC35F2Q8IXU6 374 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF440Q8IYI8 595 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 OR8H3Q8N146 312 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 METTL27Q8N6F8 245 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 COX18Q8N8Q8 333 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ACBD4Q8NC06 268 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 CAMKVQ8NCB2 501 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 C17orf47Q8NEP4 570 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 OR11H4Q8NGC9 324 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 OR1N1Q8NGS0 311 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ADAMTS18Q8TE60 1221 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 GIMAP1Q8WWP7 306 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 LIPHQ8WWY8 451 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 KAT2AQ92830 837 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 NACC2Q96BF6 587 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 C8orf44Q96CB5 159 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 CTHRC1Q96CG8 243 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 PELI1Q96FA3 418 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 S100A16Q96FQ6 103 aaKnown RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 THOC3Q96J01 351 aaKnown RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 C16orf92Q96LL3 132 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF285Q96NJ3 590 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 GPX7Q96SL4 187 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 HCAR1Q9BXC0 346 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 NMNAT2Q9BZQ4 307 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 SLC7A5P2Q9GIP4 190 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 C20orf85Q9H1P6 137 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 SLC26A1Q9H2B4 701 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 MED20Q9H944 212 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 MEPEQ9NQ76 525 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 TAS2R8Q9NYW2 309 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 KLHL9Q9P2J3 617 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 RPS6KB2Q9UBS0 482 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 CHRNA9Q9UGM1 479 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 CYB5R1Q9UHQ9 305 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 MOKQ9UQ07 419 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 SLC6A5Q9Y345 797 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 SPEF1Q9Y4P9 236 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 KLF2Q9Y5W3 355 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-201ENST00000308987 MXRA5Q9NR99 2828 aa4.35□□□□□ -1.71
CKS1B-201ENST00000308987 STAB1Q9NY15 2570 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 LOC105369274A0A096LPK9 316 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 TRBV2A0A0J9YWF9 115 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 A0A1B0GW55 424 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 A0A1B0GWA3 101 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 A0A1W2PPL8 197 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 PLSCR5A0PG75 271 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 OR2M5A3KFT3 312 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 IFITM5A6NNB3 132 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 KRBOX1C9JBD0 128 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 SMLR1H3BR10 107 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 M0R233 179 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 DVL2O14641 736 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 CREBL2O60519 120 aaPredicted RBP4.34□□□□□ -1.71
CKS1B-201ENST00000308987 DNAJB6O75190 326 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 OR7A10O76100 309 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 NDUFB6O95139 128 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 CD3GP09693 182 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 DUX4L2P0CJ85 424 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 DUX4L3P0CJ86 424 aa4.34□□□□□ -1.71
CKS1B-201ENST00000308987 DUX4L4P0CJ87 422 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms