RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 OR8U9P0C7N5 309 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 CTLA4P16410 223 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 KIR2DL3P43628 341 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 CLDN20P56880 219 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZNF121P58317 390 aaPredicted RBP10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 OPCMLQ14982 345 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 PCK2Q16822 640 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 DHRS13Q6UX07 377 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR2V1Q8NHB1 315 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 ROBO4Q8WZ75 1007 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 WFDC6Q9BQY6 131 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR14J1Q9UGF5 321 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 SH3BGRL2Q9UJC5 107 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 PLPP3O14495 311 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 SPNP16150 400 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 ACAA2P42765 397 aaKnown RBP10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 PPIAP62937 165 aaKnown RBP10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZNF85Q03923 595 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 BEX5Q5H9J7 111 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 BHLHE23Q8NDY6 225 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 GCDHQ92947 438 aaPredicted RBP10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 DOCK4Q8N1I0 1966 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR6C65A6NJZ3 312 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 SHISA7A6NL88 538 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 SMIM10L1P0DMW3 83 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 EPHA1P21709 976 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 MMP15P51511 669 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZNF133P52736 654 aaPredicted RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 FJX1Q86VR8 437 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 GABRG1Q8N1C3 465 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 NPEPL1Q8NDH3 523 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR10K1Q8NGX5 313 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 RNF128Q8TEB7 428 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 SMIM10Q96HG1 83 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 COLQQ9Y215 455 aaPredicted RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 HSPB6O14558 160 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 C1QBP02746 253 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 CCL4P13236 92 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 EIF3IQ13347 325 aaKnown RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 FAAP20Q6NZ36 180 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 CD300LFQ8TDQ1 290 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 KLK11Q9UBX7 282 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 A0A1B0GTH9 108 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZNF705EA8MWA4 302 aaPredicted RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 SIX6O95475 246 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 IGKV1D-16P01601 117 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 TPT1P13693 172 aaKnown RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 B4GALT1P15291 398 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 ALOX5APP20292 161 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 PTGS2P35354 604 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 NPY4RP50391 375 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 RBM39Q14498 530 aaKnown RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 WIPI1Q5MNZ9 446 aaPredicted RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 DMKNQ6E0U4 476 aaPredicted RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR1S1Q8NH92 325 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 ALKBH3Q96Q83 286 aaPredicted RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 RASL10BQ96S79 203 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 PLEKHB1Q9UF11 243 aaPredicted RBP10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 IGHV5-10-1A0A0J9YXX1 117 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 MT-CO3P00414 261 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 GABRB1P18505 474 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 DCTDP32321 178 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 LIMS1P48059 325 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 CAMLGP49069 296 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 SIGLEC14Q08ET2 396 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 ACER2Q5QJU3 275 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 TIGD3Q6B0B8 471 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 C9orf40Q8IXQ3 194 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZADH2Q8N4Q0 377 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 LILRB4Q8NHJ6 448 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 PRSS27Q9BQR3 290 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 BCO1Q9HAY6 547 aa10.26□□□□□ -0.77
PCDHGC3-201ENST00000308177 XRCC3O43542 346 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 MAGEB1P43366 347 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 CLN3Q13286 438 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 DEGS2Q6QHC5 323 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 KANSL1Q7Z3B3 1105 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 GLCCI1Q86VQ1 547 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 PRSS35Q8N3Z0 413 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR2Y1Q8NGV0 311 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 EIF5A2Q9GZV4 153 aaKnown RBP10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 MN1Q10571 1320 aaPredicted RBP10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 ABCA7Q8IZY2 2146 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 A0A096LPE4 126 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 A0A0D9SG52 128 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 A0A1W2PPZ6 126 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 PATE3B3GLJ2 98 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 TPOP07202 933 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 IL2RGP31785 369 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 LTBRP36941 435 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 FZD5Q13467 585 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 ISXQ2M1V0 245 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 ELFN2Q5R3F8 820 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 RFPL4BQ6ZWI9 263 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 NUDCD2Q8WVJ2 157 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZNF501Q96CX3 271 aaPredicted RBP10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 ASF1BQ9NVP2 202 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 MRPS18AQ9NVS2 196 aaKnown RBP10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 FOXJ3Q9UPW0 622 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms