RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 OR8U9P0C7N5 309 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 SLC35E2P0CK97 266 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 NME1P15531 152 aaKnown RBP13.15□□□□□ -0.3
COL6A2-201ENST00000300527 PPICP45877 212 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 RPS21P63220 83 aaKnown RBP13.15□□□□□ -0.3
COL6A2-201ENST00000300527 EGR3Q06889 387 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 MST1LQ2TV78 715 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 C5orf46Q6UWT4 87 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 FAM160A2Q8N612 972 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-201ENST00000300527 OR8U1Q8NH10 309 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 ASB13Q8WXK3 278 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 PFDN5Q99471 154 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 CNTD2Q9H8S5 307 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 HHLA2Q9UM44 414 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 TICRRQ7Z2Z1 1910 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 TEX13DA0A0J9YY54 714 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-201ENST00000300527 SCDO00767 359 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 SMIM10L1P0DMW3 83 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 CD79AP11912 226 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 CTLA4P16410 223 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 CLDN6P56747 220 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 RPS4XP62701 263 aaKnown RBP13.15□□□□□ -0.3
COL6A2-201ENST00000300527 ARFRP1Q13795 201 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 TOMM34Q15785 309 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-201ENST00000300527 EEF1A1P5Q5VTE0 462 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 SLC43A2Q8N370 569 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 MRGPRFQ96AM1 343 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 SMIM10Q96HG1 83 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 NICN1Q9BSH3 213 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 ST6GALNAC5Q9BVH7 336 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 OR8D2Q9GZM6 311 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 LYRM4Q9HD34 91 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 PNO1Q9NRX1 252 aaKnown RBP13.15□□□□□ -0.3
COL6A2-201ENST00000300527 GDF2Q9UK05 429 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-201ENST00000300527 SLC17A4Q9Y2C5 497 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 COA3Q9Y2R0 106 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-201ENST00000300527 ARHGEF17Q96PE2 2063 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-201ENST00000300527 TMEM269A0A1B0GVZ9 245 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 TGFBR3LH3BV60 316 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 SMIM6P0DI80 62 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 EGR4Q05215 589 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 ACKR1Q16570 336 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 EXD3Q8N9H8 876 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 KIRREL1Q96J84 757 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 PTGES2Q9H7Z7 377 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 CYTL1Q9NRR1 136 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 GDE1Q9NZC3 331 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 K7EQS6 105 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 FGF19O95750 216 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 DCDP81605 110 aaKnown RBP13.14□□□□□ -0.31
COL6A2-201ENST00000300527 AWAT2Q6E213 333 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 KCTD18Q6PI47 426 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-201ENST00000300527 SLC30A7Q8NEW0 376 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 OR52N4Q8NGI2 321 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 VSTM2LQ96N03 204 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 SPACA1Q9HBV2 294 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 LSM5Q9Y4Y9 91 aaKnown RBP13.14□□□□□ -0.31
COL6A2-201ENST00000300527 SPEGQ15772 3267 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 EIF1BO60739 113 aaKnown RBP13.14□□□□□ -0.31
COL6A2-201ENST00000300527 CT45A8P0DMV1 189 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 CT45A9P0DMV2 189 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 EIF1P41567 113 aaKnown RBP13.14□□□□□ -0.31
COL6A2-201ENST00000300527 HAAOP46952 286 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 AWAT1Q58HT5 328 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 CT45A2Q5DJT8 189 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 PTCRAQ6ISU1 281 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-201ENST00000300527 VWCEQ96DN2 955 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 TM4SF19Q96DZ7 209 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 OR10A5Q9H207 317 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 FAM60AQ9NP50 221 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 POLE3Q9NRF9 147 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 PRTFDC1Q9NRG1 225 aa13.14□□□□□ -0.31
COL6A2-201ENST00000300527 WISP1O95388 367 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 S100A8P05109 93 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 FAM157CP0CG43 387 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 GLI4P10075 376 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 ZNF823P16415 610 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 ARRB1P49407 418 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-201ENST00000300527 CAV2P51636 162 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 KIR2DS3Q14952 304 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 DUS4LO95620 317 aaKnown RBP13.13□□□□□ -0.31
COL6A2-201ENST00000300527 PRH1P02810 166 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 EMP2P54851 167 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 HTRA3P83110 453 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 FMODQ06828 376 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 PDZD11Q5EBL8 140 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 OR2A2Q6IF42 318 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 IL34Q6ZMJ4 242 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 OOSP2Q86WS3 158 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 AVL9Q8NBF6 648 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 CTHRC1Q96CG8 243 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 OR10C1Q96KK4 312 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 OR11A1Q9GZK7 315 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 SLCO5A1Q9H2Y9 848 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 SEC61A2Q9H9S3 476 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 TINAGQ9UJW2 476 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 EML5Q05BV3 1969 aa13.13□□□□□ -0.31
COL6A2-201ENST00000300527 A0A1B0GTQ1 180 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 A0A1W2PPE2 198 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 TMEM127O75204 238 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms