RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 FMODQ06828 376 aa18.32■□□□□ 0.52
SMCO4-201ENST00000298966 DOC2BQ14184 412 aa18.32■□□□□ 0.52
SMCO4-201ENST00000298966 KRTAP24-1Q3LI83 254 aa18.32■□□□□ 0.52
SMCO4-201ENST00000298966 SLC18B1Q6NT16 456 aa18.32■□□□□ 0.52
SMCO4-201ENST00000298966 KCTD18Q6PI47 426 aaPredicted RBP18.32■□□□□ 0.52
SMCO4-201ENST00000298966 GPR137CQ8N3F9 429 aa18.32■□□□□ 0.52
SMCO4-201ENST00000298966 SMAP2Q8WU79 429 aaPredicted RBP18.32■□□□□ 0.52
SMCO4-201ENST00000298966 SNX33Q8WV41 574 aa18.32■□□□□ 0.52
SMCO4-201ENST00000298966 GMPPAQ96IJ6 420 aaPredicted RBP18.32■□□□□ 0.52
SMCO4-201ENST00000298966 ULBP2Q9BZM5 246 aa18.32■□□□□ 0.52
SMCO4-201ENST00000298966 NDUFB11Q9NX14 153 aa18.32■□□□□ 0.52
SMCO4-201ENST00000298966 CLEC4AQ9UMR7 237 aa18.32■□□□□ 0.52
SMCO4-201ENST00000298966 DHHO43323 396 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 DANCRP0C864 163 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 ALOX5APP20292 161 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 SELENOPP49908 381 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 SH3BGRP55822 239 aaPredicted RBP18.31■□□□□ 0.52
SMCO4-201ENST00000298966 LSM6P62312 80 aaKnown RBP18.31■□□□□ 0.52
SMCO4-201ENST00000298966 SSX1Q16384 188 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 NRN1LQ496H8 165 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 CARD17Q5XLA6 110 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 RHOUQ7L0Q8 258 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 FAM220AQ7Z4H9 259 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 GATAD2BQ8WXI9 593 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 UFD1Q92890 307 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 WACQ9BTA9 647 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 BARX1Q9HBU1 254 aaPredicted RBP18.31■□□□□ 0.52
SMCO4-201ENST00000298966 MRPL22Q9NWU5 206 aaKnown RBP18.31■□□□□ 0.52
SMCO4-201ENST00000298966 BABAM2Q9NXR7 383 aa18.31■□□□□ 0.52
SMCO4-201ENST00000298966 TVP23AA6NH52 213 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 ZNF593O00488 134 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-201ENST00000298966 IGHV4-39P01824 125 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 CD3EP07766 207 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 NPR2P20594 1047 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 PSMB1P20618 241 aaKnown RBP18.3■□□□□ 0.52
SMCO4-201ENST00000298966 DBPQ10586 325 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-201ENST00000298966 FAPQ12884 760 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 CCDC58Q4VC31 144 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 LRFN4Q6PJG9 635 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 GDPGP1Q6ZNW5 385 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 DNM1P46Q6ZS02 220 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 ABHD12BQ7Z5M8 362 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-201ENST00000298966 STEAP2Q8NFT2 490 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 LILRB1Q8NHL6 650 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-201ENST00000298966 SPRYD4Q8WW59 207 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-201ENST00000298966 TBX5Q99593 518 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 NGBQ9NPG2 151 aa18.3■□□□□ 0.52
SMCO4-201ENST00000298966 CADP27708 2225 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 AIREO43918 545 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 SS18L1O75177 396 aaPredicted RBP18.29■□□□□ 0.52
SMCO4-201ENST00000298966 KRT8P05787 483 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 GADD45AP24522 165 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 GBX2P52951 348 aaPredicted RBP18.29■□□□□ 0.52
SMCO4-201ENST00000298966 MRPS34P82930 218 aaKnown RBP18.29■□□□□ 0.52
SMCO4-201ENST00000298966 DEGS2Q6QHC5 323 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 VASH1Q7L8A9 365 aaPredicted RBP18.29■□□□□ 0.52
SMCO4-201ENST00000298966 DPY19L4Q7Z388 723 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 WDFY1Q8IWB7 410 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 NSMAFQ92636 917 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 CDADC1Q9BWV3 514 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 BEX2Q9BXY8 128 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 NELFAQ9H3P2 528 aa18.29■□□□□ 0.52
SMCO4-201ENST00000298966 ESRP2Q9H6T0 727 aaKnown RBP18.29■□□□□ 0.52
SMCO4-201ENST00000298966 IGKV1D-43A0A0B4J1Z2 117 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 A0A1W2PPL8 197 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 RPL36A-HNRNPH2H7BZ11 118 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 ZNF254O75437 659 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 CD1AP06126 327 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 SPARCP09486 303 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 MSR1P21757 451 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 PSMA1P25786 263 aaKnown RBP18.28■□□□□ 0.52
SMCO4-201ENST00000298966 ROM1Q03395 351 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 TRAM1Q15629 374 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 NCMAPQ5T1S8 102 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 LYPD4Q6UWN0 246 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 TUSC5Q8IXB3 177 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 C11orf40Q8WZ69 217 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 APH1AQ96BI3 265 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 C4orf36Q96KX1 117 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 TSC22D3Q99576 134 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 COQ7Q99807 217 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 POLE4Q9NR33 117 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 COPS3Q9UNS2 423 aa18.28■□□□□ 0.52
SMCO4-201ENST00000298966 METTL15A6NJ78 407 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 GPRIN2O60269 458 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 NDUFS7O75251 213 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 GALP22466 123 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 TGM4P49221 684 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 AQP6Q13520 282 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 ZNF684Q5T5D7 378 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 LIPKQ5VXJ0 399 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 ZNF544Q6NX49 715 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 NEUROG1Q92886 237 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 S100PBPQ96BU1 408 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 C19orf24Q9BVV8 132 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 ISG20L2Q9H9L3 353 aaKnown RBP18.27■□□□□ 0.52
SMCO4-201ENST00000298966 SEC61A2Q9H9S3 476 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 LPAR3Q9UBY5 353 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 STUB1Q9UNE7 303 aa18.27■□□□□ 0.52
SMCO4-201ENST00000298966 UGT2A1Q9Y4X1 527 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms