RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 F6UZH7 168 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 PLPP1O14494 284 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 CLN5O75503 358 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 TBPP20226 339 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 MRPL19P49406 292 aaKnown RBP10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 RAB11AP62491 216 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 HES3Q5TGS1 186 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 GLIPR1L1Q6UWM5 242 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 ZNF836Q6ZNA1 936 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 SLC16A14Q7RTX9 510 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMPRSS7Q7RTY8 843 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 ANGPTL5Q86XS5 388 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 OR2L13Q8N349 312 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 NLGN4YQ8NFZ3 816 aaPredicted RBP10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 OR5D18Q8NGL1 313 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 PLSCR3Q9NRY6 295 aa10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 EP300Q09472 2414 aaPredicted RBP10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 RIF1Q5UIP0 2472 aaKnown RBP10.76□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMED7-TICAM2A0A0A6YYA0 188 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 ZNF724A8MTY0 619 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 RRP8O43159 456 aaKnown RBP10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 HCRTR1O43613 425 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 SELENOFO60613 162 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 OTX2P32243 289 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 MAP2K6P52564 334 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 CSNK1G2P78368 415 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 BAXQ07812 192 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 YOD1Q5VVQ6 348 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 LMNTD1Q8N9Z9 388 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 SCARF2Q96GP6 870 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 MAP6Q96JE9 813 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 DCBLD2Q96PD2 775 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 SLC23A2Q9UGH3 650 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMED7Q9Y3B3 224 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 IFITM5A6NNB3 132 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 A8MVM7 634 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 GPR171O14626 319 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 CBX7O95931 251 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 KIR2DL3P43628 341 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 IKZF1Q13422 519 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 TESK1Q15569 626 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMEM201Q5SNT2 666 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 EID2BQ96D98 161 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 KIRREL1Q96J84 757 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 ZNF768Q9H5H4 540 aaKnown RBP10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 PLEKHA2Q9HB19 425 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 CHD7Q9P2D1 2997 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 PRELID3BQ9Y3B1 194 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 TXNDC12O95881 172 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 CPN1P15169 458 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 ADRA2CP18825 462 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 DIO1P49895 249 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 ANKRD34AQ69YU3 496 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 NAA40Q86UY6 237 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMEM217Q8N7C4 229 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 RASD2Q96D21 266 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 LCORQ96JN0 433 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 NUDT22Q9BRQ3 303 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 C20orf24Q9BUV8 137 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 PRR14Q9BWN1 585 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 RNF32Q9H0A6 362 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 GPR27Q9NS67 375 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 ACOXLQ9NUZ1 547 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 TRAPPC2LQ9UL33 140 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 SLCO1B1Q9Y6L6 691 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 GPR179Q6PRD1 2367 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 BDP1A6H8Y1 2624 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 OR6C76A6NM76 312 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 HSPB2A8KAH6 182 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 H7C1Q1 480 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 SOD1P00441 154 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 NKX2-1P43699 371 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 SLC6A12P48065 614 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 PLGLAQ15195 96 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 HSPB2Q16082 182 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 TCTN3Q6NUS6 607 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 FJX1Q86VR8 437 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 GRAMD2AQ8IUY3 354 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 FAM58AQ8N1B3 248 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 ZNF610Q8N9Z0 462 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 SMIM4Q8WVI0 70 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 ST8SIA2Q92186 375 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 SMIM19Q96E16 107 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 IKZF5Q9H5V7 419 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 UCK1Q9HA47 277 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 BCL2L10Q9HD36 194 aa10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMEM184BQ9Y519 407 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-201ENST00000293748 ZFP92A6NM28 416 aa10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 ZNF587BE7ETH6 402 aa10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 CYTIPO60759 359 aa10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 DUSP1P28562 367 aa10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 ARRB2P32121 409 aa10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 GABREP78334 506 aa10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 SLC35A1P78382 337 aa10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 H3F3AP84243 136 aa10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 SSBP1Q04837 148 aaKnown RBP10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 Q6ZRG5 221 aa10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 BSCL2Q96G97 398 aaPredicted RBP10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 CGGBP1Q9UFW8 167 aaPredicted RBP10.74□□□□□ -0.69
SYNGAP1-201ENST00000293748 NYNRINQ9P2P1 1898 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms