RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PATE1Q8WXA2 126 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 FAHD2AQ96GK7 314 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 NRIP2Q9BQI9 281 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 BCL2L14Q9BZR8 327 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 ACKR4Q9NPB9 350 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 RCC2Q9P258 522 aaKnown RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 CA14Q9ULX7 337 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 B9D1Q9UPM9 204 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 MTCH2Q9Y6C9 303 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 PRSS37A4D1T9 235 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 PRAMEF26H0Y7S4 382 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 TO15178 435 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 NPIPB7O75200 414 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 IL2RAP01589 272 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 ABCD3P28288 659 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 AIMP2Q13155 320 aaKnown RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 MEF2DQ14814 521 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 PCK2Q16822 640 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 PNLIPRP3Q17RR3 467 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 RNF212Q495C1 297 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 ARHGAP40Q5TG30 622 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 KCTD18Q6PI47 426 aaPredicted RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 DRAM2Q6UX65 266 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 Q6ZS52 159 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 ADGRE4PQ86SQ3 457 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 TMEM200AQ86VY9 491 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 GALNT16Q8N428 558 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 C10orf53Q8N6V4 93 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 TSEN15Q8WW01 171 aaKnown RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 UCN2Q96RP3 112 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 TINAGL1Q9GZM7 467 aaPredicted RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 ATG5Q9H1Y0 275 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 TMEM231Q9H6L2 316 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 ELOVL3Q9HB03 270 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 DHCR7Q9UBM7 475 aaKnown RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 CKLFQ9UBR5 152 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 MIOXQ9UGB7 285 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 RHBDD3Q9Y3P4 386 aa9.3□□□□□ -0.92
SKA1-201ENST00000285116 TDRD6O60522 2096 aaKnown RBP9.3□□□□□ -0.92
SKA1-201ENST00000285116 TEX13DA0A0J9YY54 714 aaPredicted RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 A0A1B0GTH9 108 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 TVP23AA6NH52 213 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 M0QYG6 137 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 SMAD9O15198 467 aaKnown RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 DXOO77932 396 aaKnown RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 F13BP05160 661 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 CTSBP07858 339 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 TACR3P29371 465 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 RPL27P61353 136 aaKnown RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 BTG2P78543 158 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 GFOD2Q3B7J2 385 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 MAMDC2Q7Z304 686 aaPredicted RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 LYG2Q86SG7 212 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 NAA40Q86UY6 237 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 NKAIN3Q8N8D7 197 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 OR4K17Q8NGC6 315 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 ASB5Q8WWX0 329 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 FOXRED1Q96CU9 486 aaPredicted RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 MRPL38Q96DV4 380 aaKnown RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 AMELYQ99218 206 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 SYT4Q9H2B2 425 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 C8orf33Q9H7E9 229 aaPredicted RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 KCNG2Q9UJ96 466 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 NPIPB13A6NJU9 1138 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 ZNF705EA8MWA4 302 aaPredicted RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 C2CD4DB7Z1M9 353 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 NPIPB4C9JG80 1138 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 ZNF208O43345 1280 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 ICOSLGO75144 302 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 HTR3BO95264 441 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 IGHV2-70P01814 119 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 IGKV3-11P04433 115 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 CD2P06729 351 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 ZBTB25P24278 435 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 HTR2CP28335 458 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 CTHP32929 405 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 HHEXQ03014 270 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 CBLN3Q6UW01 205 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 BPIFB2Q8N4F0 458 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 ZDHHC22Q8N966 263 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 OR13H1Q8NG92 308 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 FAM174AQ8TBP5 190 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 PHOSPHO1Q8TCT1 267 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 PTPMT1Q8WUK0 201 aaPredicted RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 SLC39A7Q92504 469 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 ADIPOR1Q96A54 375 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 CDX2Q99626 313 aaPredicted RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 TXNIPQ9H3M7 391 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 FBLN5Q9UBX5 448 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 LHX6Q9UPM6 363 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 DHDHQ9UQ10 334 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 AHCTF1Q8WYP5 2266 aa9.29□□□□□ -0.92
SKA1-201ENST00000285116 ASCC3Q8N3C0 2202 aaKnown RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 RP1L1Q8IWN7 2480 aaPredicted RBP9.29□□□□□ -0.92
SKA1-201ENST00000285116 IGKV3D-11A0A0A0MRZ8 115 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 SPTY2D1-AS1A0A0U1RR47 76 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 ZNF736B4DX44 427 aaPredicted RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 WRBO00258 174 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms