RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 FAM168AQ92567 244 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 GTF3AQ92664 365 aaKnown RBP5.6□□□□□ -1.51
CD44-204ENST00000279452 CMBLQ96DG6 245 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 MARS2Q96GW9 593 aaKnown RBP5.6□□□□□ -1.51
CD44-204ENST00000279452 TBX5Q99593 518 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 DOK1Q99704 481 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 KCNJ15Q99712 375 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 PIMREGQ9BSJ6 248 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 ABHD6Q9BV23 337 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 VCXQ9H320 206 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 POFUT1Q9H488 388 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 PNRC2Q9NPJ4 139 aaKnown RBP5.6□□□□□ -1.51
CD44-204ENST00000279452 DECR2Q9NUI1 292 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 TBCCD1Q9NVR7 557 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 IKZF2Q9UKS7 526 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 STARD10Q9Y365 291 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 FBN2P35556 2912 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 RAI1Q7Z5J4 1906 aaPredicted RBP5.59□□□□□ -1.51
CD44-204ENST00000279452 IGHV4-30-2A0A087WSY4 118 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 TMEM129A0AVI4 362 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 CCDC182A6NF36 153 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 GGT3PA6NGU5 568 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 C17orf100A8MU93 164 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 ZNF670-ZNF695F2Z2N8 137 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 LYNX1G3V0Z9 82 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 J3QW42 95 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 CDC14BO60729 498 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 IGHV3-13P01766 116 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 CSF3P09919 207 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 LYNX1P0DP58 116 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 ZNF250P15622 560 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 PAX1P15863 534 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 SLC2A5P22732 501 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 TNFSF4P23510 183 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 PEX2P28328 305 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 MAGEB1P43366 347 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 HCCSP53701 268 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 DSCR9P59020 149 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 CCL8P80075 99 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 PSG7Q13046 419 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 TNK1Q13470 666 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 GGTLC2Q14390 218 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 TIGD6Q17RP2 521 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 SNAI3Q3KNW1 292 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 TEX30Q5JUR7 227 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 MBNL2Q5VZF2 373 aaKnown RBP5.59□□□□□ -1.51
CD44-204ENST00000279452 OR2T2Q6IF00 324 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 KCTD18Q6PI47 426 aaPredicted RBP5.59□□□□□ -1.51
CD44-204ENST00000279452 PRSS57Q6UWY2 283 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 DRAM2Q6UX65 266 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 LRRN1Q6UXK5 716 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 USP51Q70EK9 711 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 FAM57BQ71RH2 274 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 PGAP1Q75T13 922 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 SLC16A9Q7RTY1 509 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 NAA40Q86UY6 237 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 KRTAP1-3Q8IUG1 177 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 SLC35F2Q8IXU6 374 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 TIGD4Q8IY51 512 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 MAPK1IP1LQ8NDC0 245 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 OR2Z1Q8NG97 314 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 OR10H4Q8NGA5 316 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 OR10S1Q8NGN2 331 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 OR8J1Q8NGP2 316 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 OR2AE1Q8NHA4 323 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 OTOSQ8NHW6 89 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 ST7LQ8TDW4 575 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 SPRYD4Q8WW59 207 aaPredicted RBP5.59□□□□□ -1.51
CD44-204ENST00000279452 CYGBQ8WWM9 190 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 RFKQ969G6 155 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 PGAM5Q96HS1 289 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 C18orf12Q96KH6 178 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 ZNF582Q96NG8 517 aaPredicted RBP5.59□□□□□ -1.51
CD44-204ENST00000279452 MBOAT4Q96T53 435 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 AMELYQ99218 206 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 TEAD3Q99594 435 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 SLC29A1Q99808 456 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 NARFLQ9H6Q4 476 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 SP140LQ9H930 580 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 SAP30LQ9HAJ7 183 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 MSL2Q9HCI7 577 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 MYOZ1Q9NP98 299 aaPredicted RBP5.59□□□□□ -1.51
CD44-204ENST00000279452 CYSLTR2Q9NS75 346 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 DDX28Q9NUL7 540 aaKnown RBP5.59□□□□□ -1.51
CD44-204ENST00000279452 SMPD3Q9NY59 655 aaPredicted RBP5.59□□□□□ -1.51
CD44-204ENST00000279452 PURGQ9UJV8 347 aaKnown RBP5.59□□□□□ -1.51
CD44-204ENST00000279452 KLHDC2Q9Y2U9 406 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 TMEM14AQ9Y6G1 99 aa5.59□□□□□ -1.51
CD44-204ENST00000279452 SETXQ7Z333 2677 aaKnown RBP5.59□□□□□ -1.52
CD44-204ENST00000279452 ADGRG4Q8IZF6 3080 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 IGLV3-9A0A075B6K5 115 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 LOC100130705A0A1B0GUX0 176 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 ZSCAN5BA6NJL1 495 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 SNTNA6NMZ2 147 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 H3BSA7 217 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 PHYHO14832 338 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 XRCC2O43543 280 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 IGHV1-46P01743 117 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 APOC1P02654 83 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 HPXP02790 462 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms