RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 SLC35B4Q969S0 331 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 CTRB1P17538 263 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 ZNF266Q14584 549 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 RTL8BQ17RB0 113 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 XKR7Q5GH72 579 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 CTRB2Q6GPI1 263 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 PTRH1Q86Y79 214 aaKnown RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 OR11G2Q8NGC1 345 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 ALKBH3Q96Q83 286 aaPredicted RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 RBFOX1Q9NWB1 397 aaKnown RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 KLK4Q9Y5K2 254 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 TMEM235A6NFC5 223 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 NCBP2LA6PVI3 153 aaKnown RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 TBPP20226 339 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 GPM6AP51674 278 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 CDC20BQ86Y33 519 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 PBOV1Q9GZY1 135 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 BARX1Q9HBU1 254 aaPredicted RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 CSAG2Q9Y5P2 127 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 OR2A25A4D2G3 310 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 BSGP35613 385 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 TGFBR1P36897 503 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 NKX2-1P43699 371 aaPredicted RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 SNRPGP62308 76 aaKnown RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 EXOSC2Q13868 293 aaKnown RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 MRPL58Q14197 206 aaKnown RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 WIPI1Q5MNZ9 446 aaPredicted RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 ZDHHC23Q8IYP9 409 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 OR2AE1Q8NHA4 323 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 KISS1RQ969F8 398 aaPredicted RBP10.78□□□□□ -0.68
SHPRH-201ENST00000275233 SLC25A37Q9NYZ2 338 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 GAB2Q9UQC2 676 aa10.78□□□□□ -0.68
SHPRH-201ENST00000275233 MAST2Q6P0Q8 1798 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 HMX2A2RU54 273 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 AIPO00170 330 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 ARPC3O15145 178 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 UBE2G1P62253 170 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 ZNF816Q0VGE8 651 aaPredicted RBP10.77□□□□□ -0.68
SHPRH-201ENST00000275233 PDCD1Q15116 288 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 MPPED2Q15777 294 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 TAF9Q16594 264 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 CREB3L2Q70SY1 520 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 ARIH2OSQ8N7S6 290 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 OR6K3Q8NGY3 331 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 IER2Q9BTL4 223 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 ISG20L2Q9H9L3 353 aaKnown RBP10.77□□□□□ -0.68
SHPRH-201ENST00000275233 CLEC1BQ9P126 229 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 POLDIP2Q9Y2S7 368 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 UGT2A1Q9Y4X1 527 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 FLVCR1Q9Y5Y0 555 aa10.77□□□□□ -0.68
SHPRH-201ENST00000275233 ZNF121P58317 390 aaPredicted RBP10.77□□□□□ -0.69
SHPRH-201ENST00000275233 DHRS4L2Q6PKH6 230 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 ST8SIA4Q92187 359 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 TNFRSF12AQ9NP84 129 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 PRSS37A4D1T9 235 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 KRBOX1C9JBD0 128 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 OR1C1Q15619 314 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 LHX8Q68G74 356 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 FCRL6Q6DN72 434 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 OR10K2Q6IF99 312 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 TERB2Q8NHR7 220 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 ZNF71Q9NQZ8 489 aaPredicted RBP10.77□□□□□ -0.69
SHPRH-201ENST00000275233 TBX21Q9UL17 535 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 V9GYS6 101 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 PMS2P2O95744 297 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 DUSP1P28562 367 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 CTU2Q2VPK5 515 aaKnown RBP10.77□□□□□ -0.69
SHPRH-201ENST00000275233 FAM74A1Q5RGS3 127 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 ZNF620Q6ZNG0 422 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 NLRP8Q86W28 1048 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 SPEM1Q8N4L4 309 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 OR1J1Q8NGS3 322 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 OR13F1Q8NGS4 319 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 UBALD1Q8TB05 177 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 RNF141Q8WVD5 230 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 ATF6BQ99941 703 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 NRAPQ86VF7 1730 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 TSTD3H0UI37 97 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 IGLV3-27P01718 113 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 ACKR3P25106 362 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 SRSF5Q13243 272 aaKnown RBP10.77□□□□□ -0.69
SHPRH-201ENST00000275233 ZFP62Q8NB50 900 aaPredicted RBP10.77□□□□□ -0.69
SHPRH-201ENST00000275233 YIPF5Q969M3 257 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 TAAR9Q96RI9 348 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 SPNS1Q9H2V7 528 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 B3GALT5Q9Y2C3 310 aa10.77□□□□□ -0.69
SHPRH-201ENST00000275233 SLC6A12P48065 614 aa10.76□□□□□ -0.69
SHPRH-201ENST00000275233 DGCR2P98153 550 aa10.76□□□□□ -0.69
SHPRH-201ENST00000275233 HAGHQ16775 308 aa10.76□□□□□ -0.69
SHPRH-201ENST00000275233 RGS7BPQ6MZT1 257 aaPredicted RBP10.76□□□□□ -0.69
SHPRH-201ENST00000275233 TMEM200AQ86VY9 491 aa10.76□□□□□ -0.69
SHPRH-201ENST00000275233 ZNF573Q86YE8 665 aa10.76□□□□□ -0.69
SHPRH-201ENST00000275233 OR10AD1Q8NGE0 317 aa10.76□□□□□ -0.69
SHPRH-201ENST00000275233 DDX60LQ5H9U9 1706 aaKnown RBP10.76□□□□□ -0.69
SHPRH-201ENST00000275233 POU2F2P09086 479 aa10.76□□□□□ -0.69
SHPRH-201ENST00000275233 FOSL1P15407 271 aa10.76□□□□□ -0.69
SHPRH-201ENST00000275233 ZNF26P17031 533 aaPredicted RBP10.76□□□□□ -0.69
SHPRH-201ENST00000275233 TFF2Q03403 129 aa10.76□□□□□ -0.69
SHPRH-201ENST00000275233 SOHLH1Q5JUK2 328 aa10.76□□□□□ -0.69
SHPRH-201ENST00000275233 Q6ZNB5 142 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms