RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ZNF724A8MTY0 619 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 A8MVM7 634 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 IGHG1P01857 330 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 SERPINA7P05543 415 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 ZNF728P0DKX0 622 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 RPA2P15927 270 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 RPL12P30050 165 aaKnown RBP10.46□□□□□ -0.73
VPS33A-201ENST00000267199 RNF212Q495C1 297 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 C1orf140Q5VVS0 124 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 FCRL6Q6DN72 434 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 HSD17B13Q7Z5P4 300 aaPredicted RBP10.46□□□□□ -0.73
VPS33A-201ENST00000267199 ZNF561Q8N587 486 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 NKAIN3Q8N8D7 197 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 RBMXL1Q96E39 390 aaKnown RBP10.46□□□□□ -0.73
VPS33A-201ENST00000267199 GPR137Q96N19 417 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 JAM3Q9BX67 310 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 MTFP1Q9UDX5 166 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 B3GALT5Q9Y2C3 310 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 GREM1O60565 184 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 SCAF4O95104 1147 aaKnown RBP10.46□□□□□ -0.74
VPS33A-201ENST00000267199 SFTA3P0C7M3 94 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 HOXC12P31275 282 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF707Q96C28 371 aaPredicted RBP10.46□□□□□ -0.74
VPS33A-201ENST00000267199 EXOGQ9Y2C4 368 aaKnown RBP10.46□□□□□ -0.74
VPS33A-201ENST00000267199 GPANK1O95872 356 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 CD37P11049 281 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 CSNK1A1P48729 337 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 PLP2Q04941 152 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 ADIRFQ15847 76 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 TMEM176BQ3YBM2 270 aaPredicted RBP10.46□□□□□ -0.74
VPS33A-201ENST00000267199 TMEM164Q5U3C3 297 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 TMEM123Q8N131 208 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 SPICQ8N5J4 248 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 FAM174AQ8TBP5 190 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 RNF128Q8TEB7 428 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 PIGCQ92535 297 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 CMBLQ96DG6 245 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 PIGQQ9BRB3 760 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 SAMD10Q9BYL1 202 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 OPN4Q9UHM6 478 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 LSM2Q9Y333 95 aaKnown RBP10.46□□□□□ -0.74
VPS33A-201ENST00000267199 MMACHCQ9Y4U1 282 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 PCDHGA5Q9Y5G8 931 aa10.46□□□□□ -0.74
VPS33A-201ENST00000267199 SIRT4Q9Y6E7 314 aaPredicted RBP10.46□□□□□ -0.74
VPS33A-201ENST00000267199 IGHV3-20A0A0C4DH32 117 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 RNASEK-C17orf49H0YIS7 233 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 FOLR1P15328 257 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 PTAFRP25105 342 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 MESP2Q0VG99 397 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 MALLQ13021 153 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 IKZF1Q13422 519 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF239Q16600 458 aaKnown RBP10.45□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF705AQ6ZN79 300 aaPredicted RBP10.45□□□□□ -0.74
VPS33A-201ENST00000267199 OR4D10Q8NGI6 311 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 OR4C3Q8NH37 302 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 GHITMQ9H3K2 345 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 PCDHGA9Q9Y5G4 932 aaKnown RBP10.45□□□□□ -0.74
VPS33A-201ENST00000267199 RGPD3A6NKT7 1758 aaPredicted RBP10.45□□□□□ -0.74
VPS33A-201ENST00000267199 RGPD4Q7Z3J3 1758 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 OR6C6A6NF89 314 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 A6NLC8 198 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 ZFAND5O76080 213 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 JTBO76095 146 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 TSLPQ969D9 159 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 RPP25Q9BUL9 199 aaKnown RBP10.45□□□□□ -0.74
VPS33A-201ENST00000267199 RSRP1Q9BUV0 290 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 OR51B6Q9H340 312 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 PATZ1Q9HBE1 687 aaKnown RBP10.45□□□□□ -0.74
VPS33A-201ENST00000267199 C7orf66A4D0T2 115 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 PHOX2AO14813 284 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 LILRB5O75023 590 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 F12P00748 615 aaPredicted RBP10.45□□□□□ -0.74
VPS33A-201ENST00000267199 RPL27P61353 136 aaKnown RBP10.45□□□□□ -0.74
VPS33A-201ENST00000267199 EEF1A2Q05639 463 aaKnown RBP10.45□□□□□ -0.74
VPS33A-201ENST00000267199 PPP1R1AQ13522 171 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 NR0B2Q15466 257 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 VWA2Q5GFL6 755 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 PRAMEF20Q5VT98 475 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 OR14L1PQ8NHC6 308 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 OR51E1Q8TCB6 317 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 NT5CQ8TCD5 201 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 OR2A5Q96R48 311 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 NPAS1Q99742 590 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 MRPS2Q9Y399 296 aaKnown RBP10.45□□□□□ -0.74
VPS33A-201ENST00000267199 ANK1P16157 1881 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 OR6C68A6NDL8 312 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 OPRM1P35372 400 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 KCNJ3P48549 501 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 RIN1Q13671 783 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF74Q16587 644 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 SHEQ5VZ18 495 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 FAM219AQ8IW50 185 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 FAM24BQ8N5W8 94 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 ARIH2OSQ8N7S6 290 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 OR5M9Q8NGP3 310 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 NUBPLQ8TB37 319 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 LRFN5Q96NI6 719 aa10.45□□□□□ -0.74
VPS33A-201ENST00000267199 FAM221AA4D161 298 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 P04436 131 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 CHRM2P08172 466 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms