RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 GPANK1O95872 356 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 TMEM104Q8NE00 496 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 OR56B2PQ8NGI1 322 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 PRDM7Q9NQW5 492 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 LPAR3Q9UBY5 353 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 PCDHGA1Q9Y5H4 931 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 ENTPD2Q9Y5L3 495 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 KNTC1P50748 2209 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 ABCA3Q99758 1704 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 CEBPZOSA8MTT3 80 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 CRHP06850 196 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 HHEXQ03014 270 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 TMEM41BQ5BJD5 291 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 C17orf99Q6UX52 265 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 RFLNBQ8N5W9 214 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 OR10AC1Q8NH08 325 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 NRIP2Q9BQI9 281 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 OR10A5Q9H207 317 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 TRAV8-7A0A075B6U6 113 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 DNASE2O00115 360 aaPredicted RBP13.65□□□□□ -0.22
CASC3-201ENST00000264645 TBX19O60806 448 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 CST4P01036 141 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 OR1D4P47884 311 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 ACKR1Q16570 336 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 HFEQ30201 348 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 OR2B11Q5JQS5 317 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 RBMS3Q6XE24 437 aaKnown RBP13.65□□□□□ -0.22
CASC3-201ENST00000264645 ZNF2Q9BSG1 426 aaPredicted RBP13.65□□□□□ -0.22
CASC3-201ENST00000264645 PLEK2Q9NYT0 353 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 TNFSF18Q9UNG2 199 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 CCDC85CA6NKD9 419 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
CASC3-201ENST00000264645 METAP1P53582 386 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 SERTAD2Q14140 314 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 PABPC1L2AQ5JQF8 200 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 ADIPOR2Q86V24 386 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 OR51M1Q9H341 326 aa13.65□□□□□ -0.22
CASC3-201ENST00000264645 OR6C6A6NF89 314 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 LCATP04180 440 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 SLC35E2P0CK97 266 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 ASCL1P50553 236 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 EFNB2P52799 333 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 HTRA3P83110 453 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 EGR3Q06889 387 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 TAF9Q16594 264 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 ZNF600Q6ZNG1 722 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 CLEC1AQ8NC01 280 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 OR4N2Q8NGD1 307 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 WDR34Q96EX3 536 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 NUDT9Q9BW91 350 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 NRSN2Q9GZP1 204 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 ALKBH2Q6NS38 261 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 LCN15Q6UWW0 184 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 HHIPQ96QV1 700 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 PTGES2Q9H7Z7 377 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 HEXA-AS1Q9H8Q6 139 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 PDE7BQ9NP56 450 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 FLVCR1Q9Y5Y0 555 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 OR7C1O76099 320 aaPredicted RBP13.64□□□□□ -0.23
CASC3-201ENST00000264645 CTSAP10619 480 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 HAAOP46952 286 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 GSK3AP49840 483 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 OR2L13Q8N349 312 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 SEMA6DQ8NFY4 1073 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 BMFQ96LC9 184 aa13.64□□□□□ -0.23
CASC3-201ENST00000264645 MBNL1Q9NR56 388 aaKnown RBP13.64□□□□□ -0.23
CASC3-201ENST00000264645 NPIPA2E9PIF3 369 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 NPIPA3F8WFD2 350 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 DUS4LO95620 317 aaKnown RBP13.63□□□□□ -0.23
CASC3-201ENST00000264645 SERPINA7P05543 415 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 HEXBP07686 556 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 DBHP09172 617 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 PAX6P26367 422 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 PRSS53Q2L4Q9 553 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 PIGTQ969N2 578 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 SAT2Q96F10 170 aaPredicted RBP13.63□□□□□ -0.23
CASC3-201ENST00000264645 C4orf45Q96LM5 186 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 SFXN1Q9H9B4 322 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 SSC5DA1L4H1 1573 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 A0A0B4J2E0 115 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 A0A1B0GX12 115 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 MPTX1A8MV57 137 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 TCAPO15273 167 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 MUC1P15941 1255 aaPredicted RBP13.63□□□□□ -0.23
CASC3-201ENST00000264645 MTCP1P56278 107 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 RUNX2Q13950 521 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 FAM185AQ8N0U4 392 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 LGI3Q8N145 548 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 STT3BQ8TCJ2 826 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 PIK3IP1Q96FE7 263 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 SDSLQ96GA7 329 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 LIN37Q96GY3 246 aaPredicted RBP13.63□□□□□ -0.23
CASC3-201ENST00000264645 PLEKHA2Q9HB19 425 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 GDF2Q9UK05 429 aaPredicted RBP13.63□□□□□ -0.23
CASC3-201ENST00000264645 PADI1Q9ULC6 663 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 TRAV36DV7A0A075B6V5 113 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 A0A0J9YY10 115 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 H7BYZ3 331 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 OPRM1P35372 400 aa13.63□□□□□ -0.23
CASC3-201ENST00000264645 ADAMTSL4Q6UY14 1074 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms