RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 C13orf42A0A1B0GVH6 325 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 FAM221BA6H8Z2 402 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 CD2P06729 351 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 RORAP35398 523 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 PLCXD2Q0VAA5 305 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 OR7A5Q15622 319 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 DEFB133Q30KQ1 61 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 C9orf40Q8IXQ3 194 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 TMEM185AQ8NFB2 350 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 OR5T2Q8NGG2 359 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 DNASE2BQ8WZ79 361 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 C8orf44Q96CB5 159 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 LRRC46Q96FV0 321 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 NUDT22Q9BRQ3 303 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 POTEKPQ9BYX7 375 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 ADAM19Q9H013 955 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 CST11Q9H112 138 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 PTGES2Q9H7Z7 377 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 LANCL2Q9NS86 450 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 LHX6Q9UPM6 363 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 ABCA7Q8IZY2 2146 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 TRAV36DV7A0A075B6V5 113 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 TMED7-TICAM2A0A0A6YYA0 188 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 IGLV1-36A0A0B4J1U3 117 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 ZNF735P0CB33 412 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 GP1BBP13224 206 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 PTAFRP25105 342 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 ACTBP60709 375 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 ACTG1P63261 375 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 PPP1R1AQ13522 171 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 NSDHLQ15738 373 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 PAN3Q58A45 887 aaKnown RBP8.99□□□□□ -0.97
LIG3-201ENST00000262327 PABPC1L2AQ5JQF8 200 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 HLA-DQA1Q5Y7H0 255 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 MAMDC2Q7Z304 686 aaPredicted RBP8.99□□□□□ -0.97
LIG3-201ENST00000262327 WDR5BQ86VZ2 330 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 ADAD2Q8NCV1 583 aaKnown RBP8.99□□□□□ -0.97
LIG3-201ENST00000262327 BPIFCQ8NFQ6 507 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 OR6K3Q8NGY3 331 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 OR6S1Q8NH40 331 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 LIPHQ8WWY8 451 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 ZBTB8AQ96BR9 441 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 FGGYQ96C11 551 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 ARL5BQ96KC2 179 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 PRMT8Q9NR22 394 aaPredicted RBP8.99□□□□□ -0.97
LIG3-201ENST00000262327 MBD2Q9UBB5 411 aa8.99□□□□□ -0.97
LIG3-201ENST00000262327 THADAQ6YHU6 1953 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 TMEM269A0A1B0GVZ9 245 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 TMEM150CB9EJG8 249 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 EIF3GO75821 320 aaKnown RBP eCLIP8.98□□□□□ -0.97
LIG3-201ENST00000262327 PMS2P2O95744 297 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 ACAA1P09110 424 aaPredicted RBP8.98□□□□□ -0.97
LIG3-201ENST00000262327 ZNF806P0C7X5 589 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 RPA2P15927 270 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 GNB3P16520 340 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 DLSTP36957 453 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 EMC4Q5J8M3 183 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 FAM166AQ6J272 317 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 TMEM88Q6PEY1 159 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 LANCL3Q6ZV70 420 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 FJX1Q86VR8 437 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 ZNF584Q8IVC4 421 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 NAXDQ8IW45 347 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 TCTN2Q96GX1 697 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 VDAC3Q9Y277 283 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 LRP4O75096 1905 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 FRYLO94915 3013 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 KANTRA0A1W2PQU2 76 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 DDAH2O95865 285 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 SLC2A1P11166 492 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 PI3P19957 117 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 CAPZBP47756 277 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 RELQ04864 619 aaPredicted RBP8.98□□□□□ -0.97
LIG3-201ENST00000262327 TSC22D1Q15714 1073 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 HFEQ30201 348 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 PAPD4Q6PIY7 484 aaKnown RBP8.98□□□□□ -0.97
LIG3-201ENST00000262327 TMPPEQ6ZT21 453 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 TRAPPC6BQ86SZ2 158 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 CATSPERDQ86XM0 798 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 ARL6IP6Q8N6S5 226 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 OR2I1PQ8NGU4 316 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 CCDC107Q8WV48 283 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 ROBO4Q8WZ75 1007 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 ADIPOR1Q96A54 375 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 SOX7Q9BT81 388 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 LAT2Q9GZY6 243 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 CNTD2Q9H8S5 307 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 BIN3Q9NQY0 253 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 COMMD9Q9P000 198 aa8.98□□□□□ -0.97
LIG3-201ENST00000262327 PHF3Q92576 2039 aaKnown RBP8.97□□□□□ -0.97
LIG3-201ENST00000262327 A0A1B0GTQ1 180 aa8.97□□□□□ -0.97
LIG3-201ENST00000262327 F5H0A9 414 aaPredicted RBP8.97□□□□□ -0.97
LIG3-201ENST00000262327 H3BML4 177 aa8.97□□□□□ -0.97
LIG3-201ENST00000262327 ATG12O94817 140 aa8.97□□□□□ -0.97
LIG3-201ENST00000262327 HTR3BO95264 441 aa8.97□□□□□ -0.97
LIG3-201ENST00000262327 PMP2P02689 132 aa8.97□□□□□ -0.97
LIG3-201ENST00000262327 MC2RQ01718 297 aa8.97□□□□□ -0.97
LIG3-201ENST00000262327 TEX30Q5JUR7 227 aa8.97□□□□□ -0.97
LIG3-201ENST00000262327 C1orf140Q5VVS0 124 aa8.97□□□□□ -0.97
LIG3-201ENST00000262327 JMJD6Q6NYC1 403 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms