RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 OR52N1Q8NH53 320 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 TSLPQ969D9 159 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 ZIC5Q96T25 663 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 PLSCR3Q9NRY6 295 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 SLC22A11Q9NSA0 550 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 LAMB1P07942 1786 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 NCBP2LA6PVI3 153 aaKnown RBP13.02□□□□□ -0.33
CUX2-201ENST00000261726 LIPAP38571 399 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 OR2B8PP59922 312 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 BCORP1Q8N888 145 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 C12orf10Q9HB07 376 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 LRP5O75197 1615 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 POU2F2P09086 479 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 BAMBIQ13145 260 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 TMEM99Q8N816 258 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 SLC38A9Q8NBW4 561 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 OR2AK2Q8NG84 335 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 MBNL1Q9NR56 388 aaKnown RBP13.02□□□□□ -0.33
CUX2-201ENST00000261726 ZNF346Q9UL40 294 aaKnown RBP13.02□□□□□ -0.33
CUX2-201ENST00000261726 OR51B4Q9Y5P0 310 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 CHRM2P08172 466 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 ZNF816Q0VGE8 651 aaPredicted RBP13.02□□□□□ -0.33
CUX2-201ENST00000261726 RNF167Q9H6Y7 350 aa13.02□□□□□ -0.33
CUX2-201ENST00000261726 TUBGCP6Q96RT7 1819 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 SYT5O00445 386 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 ICMTO60725 284 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 NRASP01111 189 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 CTXN2P0C2S0 81 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 CD80P33681 288 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 RPS19P39019 145 aaKnown RBP13.01□□□□□ -0.33
CUX2-201ENST00000261726 KRTDAPP60985 99 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 ZNF787Q6DD87 383 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 SLC37A2Q8TED4 501 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 UBTD2Q8WUN7 234 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 LRFN3Q9BTN0 628 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 MENTQ9BUN1 341 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 PSENENQ9NZ42 101 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 ZNF785A8K8V0 405 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 K7ESM1 405 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 LALBAP00709 142 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 ARR3P36575 388 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 NKAIN1Q4KMZ8 207 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 WDR88Q6ZMY6 472 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 OLIG1Q8TAK6 271 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 H0Y8X5 98 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 H3F3AP84243 136 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 PMP22Q01453 160 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 LIPNQ5VXI9 398 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 LYSMD2Q8IV50 215 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 L3MBTL4Q8NA19 623 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 MOB3AQ96BX8 217 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 CMBLQ96DG6 245 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 OR8B4Q96RC9 309 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 P4HTMQ9NXG6 502 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 LDLRAD1Q5T700 205 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 NLRC3Q7RTR2 1065 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 NHLRC2Q8NBF2 726 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 SARGQ9BW04 601 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 ZNF586Q9NXT0 402 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 CLEC5AQ9NY25 188 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 PLPP1O14494 284 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 PRKNO60260 465 aaPredicted RBP13.01□□□□□ -0.33
CUX2-201ENST00000261726 HIST1H1CP16403 213 aaKnown RBP13.01□□□□□ -0.33
CUX2-201ENST00000261726 SNRPNP63162 240 aaKnown RBP13.01□□□□□ -0.33
CUX2-201ENST00000261726 VWA2Q5GFL6 755 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 TMED6Q8WW62 240 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 STACQ99469 402 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 TEAD3Q99594 435 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 MAGT1Q9H0U3 335 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 PIGMQ9H3S5 423 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 NARFLQ9H6Q4 476 aa13.01□□□□□ -0.33
CUX2-201ENST00000261726 LIN7CQ9NUP9 197 aaKnown RBP13.01□□□□□ -0.33
CUX2-201ENST00000261726 LOC102723971A0A1B0GUV8 181 aa13□□□□□ -0.33
CUX2-201ENST00000261726 GOSR1O95249 250 aa13□□□□□ -0.33
CUX2-201ENST00000261726 SLC25A4P12235 298 aa13□□□□□ -0.33
CUX2-201ENST00000261726 CD276Q5ZPR3 534 aa13□□□□□ -0.33
CUX2-201ENST00000261726 RXFP4Q8TDU9 374 aa13□□□□□ -0.33
CUX2-201ENST00000261726 SLC25A43Q8WUT9 341 aaPredicted RBP13□□□□□ -0.33
CUX2-201ENST00000261726 KIR3DX1Q9H7L2 352 aa13□□□□□ -0.33
CUX2-201ENST00000261726 NDRG3Q9UGV2 375 aa13□□□□□ -0.33
CUX2-201ENST00000261726 STRAPQ9Y3F4 350 aaKnown RBP13□□□□□ -0.33
CUX2-201ENST00000261726 SOX15O60248 233 aa13□□□□□ -0.33
CUX2-201ENST00000261726 EIF4E2O60573 245 aaKnown RBP13□□□□□ -0.33
CUX2-201ENST00000261726 RPL7P18124 248 aaKnown RBP13□□□□□ -0.33
CUX2-201ENST00000261726 S100A4P26447 101 aaKnown RBP13□□□□□ -0.33
CUX2-201ENST00000261726 AKR1C3P42330 323 aa13□□□□□ -0.33
CUX2-201ENST00000261726 DMRTC1Q5HYR2 192 aa13□□□□□ -0.33
CUX2-201ENST00000261726 RPUSD3Q6P087 351 aaKnown RBP13□□□□□ -0.33
CUX2-201ENST00000261726 GABRG1Q8N1C3 465 aa13□□□□□ -0.33
CUX2-201ENST00000261726 OR13F1Q8NGS4 319 aa13□□□□□ -0.33
CUX2-201ENST00000261726 OR2T6Q8NHC8 308 aa13□□□□□ -0.33
CUX2-201ENST00000261726 SPI1P17947 270 aa13□□□□□ -0.33
CUX2-201ENST00000261726 FGF7P21781 194 aa13□□□□□ -0.33
CUX2-201ENST00000261726 CD27P26842 260 aa13□□□□□ -0.33
CUX2-201ENST00000261726 GPR84Q9NQS5 396 aa13□□□□□ -0.33
CUX2-201ENST00000261726 CRYAAP02489 173 aa13□□□□□ -0.33
CUX2-201ENST00000261726 NPPBP16860 134 aa13□□□□□ -0.33
CUX2-201ENST00000261726 IRS1P35568 1242 aa13□□□□□ -0.33
CUX2-201ENST00000261726 CDK5Q00535 292 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms